Actinomyces sp. Chiba101: CHIBA101_1833
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Entry
CHIBA101_1833 CDS
T05279
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
actc
Actinomyces sp. Chiba101
Pathway
actc03420
Nucleotide excision repair
actc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHIBA101_1833
03430 Mismatch repair
CHIBA101_1833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actc03400
]
CHIBA101_1833
Enzymes [BR:
actc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHIBA101_1833
DNA repair and recombination proteins [BR:
actc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHIBA101_1833
MMR (mismatch excision repair)
Other MMR factors
CHIBA101_1833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
AAA_12
MlaD
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAW93666
LinkDB
All DBs
Position
complement(2172968..2175883)
Genome browser
AA seq
971 aa
AA seq
DB search
MSNATNTLFSGLAMPGATAGPGHGPRPPAEAALPSLAPSASGWDGWEDDDSWAGVEPPDD
AAPDPEETIPPEDADAVAPTWEERQAEVADLVARAQAGAARARAAAEGAPTAAPHGRGTR
AWDSPLAVGSPDGLVAGLNPAQAAAVTHAGAPLLIIAGAGSGKTRVLTHRIAHLLATGRA
RPGEILAITFTNKAAAEMRERVTALVGPAGGRMWVSTFHSACVRILRREHEAAGLRSTFS
IYDAADSTRLVTLIVRELGIDPKRFTPKAFAHRISDLKNELVTPAEYAEKAVTANPFERY
LAEVYTAYASRLASANALDFDDLIMRTVQLLQAKPAVAEMYRRRFRHILVDEYQDTNHAQ
YVLVRELVGGPGTSGEGSALPPAELTVVGDSDQSIYAFRGATIRNIEEFEQDYPSARTIL
LEQNYRSTQNILDAANAVISRNTGRRPKKLFTDSGPGAPITGYVADSEHDEARWISSEID
RLADEHGVRPRDIAVFYRTNAQSRALEEVFIRAGQPYKVIGGTRFYERREIKDAIAYLRA
VDNPDDDVSLRRILNVPKRGLGEKAEAALAEHGARHRVSFSDAIADAAGAPRPGPTEAEA
QGAPEVEGLATRARAQVTRFHELLEGLRHQQASGDGVADILDSALDASGYLAELRASDDP
QDATRVENLAELHSVAADFQAANPEGSLADFLERVSLVADSDQLPSAEGTASEEAAAQAH
EAAEQGQITLMTVHTAKGLEFPVVFITGMEDGTFPHSRALAEDSELSEERRLAYVALTRA
RERLYVTRAAVRSAWGQATAMPASRFLDDIPPETMDWKRLASSMDALSGGGTGWGRRAGG
TGQGGSRGSWHSDDDDFAPPIGARPARTGRIGRVETAKDRAAKRAAAKKGSAPVRLDGSE
RSSGNGGEEELPAAVQGLRVGDGVRHDSYGVGTVIALEGTGRSKVARVEFTIDGARAVKR
LMLRLAPLAKA
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgcgacgaacaccctcttctccggccttgccatgcccggcgccacggcgggc
cccgggcatggcccccgccccccggccgaggccgccctgccctccctcgcccccagcgcc
tcgggctgggacggctgggaggacgatgactcctgggccggcgtcgagccccccgacgac
gccgcgccggaccccgaggagaccatcccgccggaggacgccgacgccgtcgcccccacc
tgggaggagcgccaggccgaggtcgccgatctcgtcgcccgcgcccaggcgggcgccgcc
cgtgcccgcgcagccgccgagggagcccccaccgccgccccccacggccggggcacccgg
gcctgggactcccccctggccgtcgggagcccggacgggctcgtcgcgggtctcaacccc
gcccaggcggccgccgtcacccatgccggcgcccccctgctcatcatcgccggcgccggg
agcggcaagacccgcgtcctgacccaccgcatcgcccacctgctggccaccggccgtgcc
cgccccggcgagatcctcgcgatcaccttcaccaataaggccgccgcggagatgcgcgag
cgggtcaccgcgctcgtcgggcccgccggggggcgcatgtgggtctccaccttccactcc
gcctgcgtgcgcatcctgcgccgcgagcacgaggccgccggcctgcgctccaccttctcc
atctacgacgccgccgactccacgcggctggtcaccctcatcgtgcgcgagctgggcatc
gaccccaagcgcttcactcccaaggccttcgcccaccgcatctccgacctcaagaacgag
ctcgtcacccccgccgagtacgcggagaaggcggtgaccgccaatcccttcgagcgctac
ctcgccgaggtctacaccgcctacgcctcgcgcctggcctccgccaacgcccttgacttc
gacgacctcatcatgcgcacggtccagttgctccaggccaagcccgcggtggcggagatg
taccggcgccgtttccgccacatcctcgtcgacgagtaccaggacaccaatcacgcccag
tacgttctcgtgcgcgagctcgtcggcggccccggcacctccggggagggctcggcgctc
ccgccggccgagctgaccgtggtgggggactccgaccagtccatctacgccttccgcggc
gccaccatccgcaacatcgaggagttcgagcaggactacccgtccgcccgcaccatcctg
ctggagcagaactaccgctccacccagaacatcctcgacgccgccaacgccgtcatctcg
cgcaacaccgggcgccgccccaagaagctcttcaccgactccgggcccggcgcccccatc
accggctacgtggccgactccgagcacgacgaggcccgctggatctcctccgagatcgac
cgcctcgccgacgagcacggggtgaggccccgggacatcgcggtcttctaccgcaccaac
gcccagtcccgcgccctggaggaggtcttcatccgagccggccagccctacaaggtcatc
ggcggcacccgcttctacgagcggcgcgagatcaaggacgccatcgcctacctgcgcgcc
gtggacaacccggatgacgacgtctccctgcgccgcatcctcaacgtccccaagcgcggg
ctgggggagaaggccgaggccgccctcgccgagcacggcgcccgccaccgcgtgtccttc
tccgacgccatcgccgatgccgccggggcgccccgcccgggcccgaccgaggccgaggcg
cagggagccccggaggtcgagggcctggccacccgcgcccgggcccaggtcacccgcttc
catgagctcctcgagggcctgcgtcaccagcaggcctcgggcgacggcgtcgccgacatc
ctcgactccgccctcgacgcctccggttacctcgccgagctgcgcgcctccgacgatccc
caggatgccacccgcgtggagaaccttgccgagctccactccgtggccgccgacttccag
gccgccaaccccgaggggagcctcgccgacttcctggagcgcgtgagcctcgtcgccgac
tccgatcagctcccctccgccgagggcaccgccagtgaggaggccgcggcgcaggcccat
gaggcggccgagcagggccagatcaccctcatgaccgtccacaccgccaagggcctggag
ttcccggtcgtcttcatcaccggcatggaggacggcaccttcccgcactcccgggccctg
gccgaggactccgagctctccgaggagcggcgcctggcctacgtggcactcacccgcgcg
cgcgagcggctctacgtcacccgcgccgccgtgcgctccgcctgggggcaggccaccgcc
atgcccgcctcccgcttcctcgacgacatcccgcccgagaccatggactggaagcgcctg
gcctcctccatggacgccctgagcgggggcggcaccggctgggggaggagggccggcggg
accggccaggggggctcgcgcggctcctggcactccgacgacgacgatttcgcgcccccg
atcggcgcccgccccgcgcgcaccggcaggatcgggcgcgtggagaccgccaaggaccgg
gccgccaagcgcgccgccgcgaagaagggatccgccccggtccgcctggatggcagcgag
aggtcctcgggcaacggcggggaggaggagctccccgcggccgtccagggcctgcgcgtg
ggggacggcgtgcgccacgactcctacggcgtcggcaccgtgatcgccctggagggcacg
ggccgctcgaaggtcgcccgcgtcgagttcaccattgacggtgcccgcgccgtcaagcgc
ctcatgctgcgcctggcgcccctggccaaggcctga
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