Actinomyces sp. Chiba101: CHIBA101_2170
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Entry
CHIBA101_2170 CDS
T05279
Name
(GenBank) VCBS protein
KO
K20276
large repetitive protein
Organism
actc
Actinomyces sp. Chiba101
Pathway
actc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
actc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHIBA101_2170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
fn3
Bact_surface_Ig-like
He_PIG
Motif
Other DBs
NCBI-ProteinID:
BAW93998
UniProt:
A0A1Q2TR48
LinkDB
All DBs
Position
2560116..2566196
Genome browser
AA seq
2026 aa
AA seq
DB search
MPSSIVRTLGGRIRRRGAGALAVLCAAALGLAAVQHQGIAQQDLDLHDDGVWVTSTSKHL
VARINASSHEADGVIRTASSDFDVSQHGEDVLVSDVSASSVDKVDPALVSSASVGTLPSG
TTIAQGADRVIAINSADGTVSGALASEAGIVTGGSASPIISDAPGLLATIGTDGAIHALS
PSTGALTTATATATAWAAPTSTALTLSAGADAEITAVGSEPIVLERGTGILHLPGGATVD
LGETGLALQQPGPDASSVLVASRTELISAPLDGSSPTRTPSAEKGDAAPGVAARPVRLGA
CSYAAWSSSGQFLRMCGSSTPEYIHDDALASSTTPVFRTNRDAIVLNDTTIGTVWLPDQN
LAQADEWTENSGHSSDDATPDENAKDTTEDPAQTPDRDEENPPDAVDDSFGVRAGRTTIL
PVLANDSDPDGDVLTAVPGDAGSTATVTQVQGGLALAINVPAGATGTITVPYTADDGRGM
SDSAVATVTIRPDSENSAPEQQAAQTLKLAEGGTDSISVLSNWRDPDGDDLHLVSATGVG
LETRTTPEGLLTVTELTGGTGPREMTLIVSDGRTTAEGSMTVDVVPAADAVPATHADHAR
GVVGQQVTISPLANDSSPTSTPLRLGSISEPPTGTTATKDQAAGTVTFTAQSAGTYYLDY
EASDGTSLAKGLIRVDIAEASDPSAAPIVEDDTVFLAPGGSVTVNPLANDSDPAGGVLVA
VSATTPPASGVSATVVDHSLMQISAVGELQGKTTAEYTVSNGTTTATGTITIVPLPDSAS
QPPIGVNDTAVVRAGDIVTVPVLENDASPSGLSLTTTGELNIPDDSLGTAWINQDKLRVK
AGQTPGTMEMSYTVQDSAGQTATATAAIEVRERNDAANAAPEPRPVTAATIAGKEVSMTV
PLDRIDPDGDSVTLTGLATQPTKGSVEVKGNVLVYTAFEGSSGTDSFTYTVTDHLGATAT
GTARVGIAAPAAVNTPPKTTDDLVTAKPGRKVRVDVTANDWDSDDDPVTLAGEPTSEDPA
LTASAVNGQVALELPEAEGNYTVHYTATDSRGGTALGTLTAQVRADAPPQAPIAADDAVT
LSDIDASGTALVDVLKNDSDPDGSPETLTVSASDPNAAVEGNALRVTVTDSAQLILYTVT
DPDGLTGQAVVSVPASSDLVPQINPSTTPVRIPADTTTSIPLASHVLTRSGTSPVIGDES
SITAGAGLSSAGAEGNGSLSVTPSSGFTGQTSVSLTVADGTDDGALSAALSLPILVESTE
NRAPTFIPTAVTVAPNETPVTVDLSAMATDPDGDALTFTIGSASAGFTASQSGSSVTVGA
DAATAAGTTGSLPVTVSDGKNPEVSASLPLAASASTRPRMTTTPATLSSNGEAVTVDVSA
YVSNPFPDQGITLSGTPTITSGQGSVSASGTSLTITPSAGATGDIVVRYQVLDATGAADR
AATGTVTVTVASAPSAPTQVAAEARDYGSARVTWSPGSANGSPITGYTLTEVGGAGSWSC
TGSPCYATGLTAGRSYTFEVTATNANGTSSAGRSNTVTLGPSAPGAPSGVRIQAGEGTLT
ASWTPGAAVPGTQTSYRVVFHSDDGDITRTTTGTSLTIGASDGVQAGGSYSVTVTAIARS
GGSEVGSSKSASSGSSATPYGKPGSFEITSVVQTGSGVTVSWQGASPNHAGPVSYTVSVT
GPQSRTVHAGSALSSSISLSASGTYTFSVRATTRAGSTDSSNTKSINLDLRSKPPAPTGL
SASPTHVEGQISVSASPQAGNGWSAGDLTPEFRVNGSDWGTRKTFSNLPAGQNVTVEARV
YGTRQDGSTVYSDVVTTSVTAIGSPGRPDVECRLNQATGWMDCWVVHWSYYTGGDPSLSY
TSYEADAHENRTGPIQDPAQPSFGKQLSDGQTLGWCVEARNSYGFKSWDCESKTWNKPEQ
PKQENQAKPDGQYQVLPIQTTSPDAVCTASDLAKSGYSAGGCWRVVLDFSVFPPGTPLLC
NFDDTNVWPSSAPYYAFRNSNHSPEWRSVTLTNNPNLTVTCEVTTG
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
gtgccctcctccatcgtccgcaccctgggcggccggatccgacgccgcggcgccggtgcc
ctggccgttctctgcgctgcggccctgggcctggccgccgtgcagcaccagggcatcgcc
cagcaggacctcgacctccacgatgacggcgtctgggtgacctcgacgtcgaagcacctc
gtggcccgcatcaacgcctcctcccatgaggcggatggcgtcatccgcacggcgtcgtcg
gacttcgacgtcagccagcacggtgaggacgtcctcgtctccgacgtctccgcgagctcg
gtggacaaggtcgatccggcgctggtctccagcgcgtcggtgggcaccctgccctccggg
accacgatcgcccagggcgcggaccgcgtcatcgcgatcaactcggccgatggcaccgtc
agcggcgccctggccagcgaggcgggcatcgtcaccggcggctcggcctccccgatcatc
tccgatgcccccggcctcctggcgacgatcgggaccgacggcgccatccacgccctgtcc
ccctccaccggcgccctcaccacggccacggccacggccaccgcctgggcggcccccacc
tccaccgcgctgacgctctcggccggcgcggatgccgagatcaccgccgtcggttccgag
ccgatcgtcctggagcgcggcaccggcatcctccacctgcccgggggtgccaccgtcgac
ctcggcgagacgggcctggccctccagcagcccggaccggacgcctccagtgtgctcgtc
gcctcgcgcacggagctcatcagcgcgcccctcgacggctcgtcgcccacgcgcaccccc
tcggcggagaagggcgacgcggcccccggagtcgccgcccgccccgtccgcctgggcgcc
tgctcctacgcggcctggtcctcctccgggcagttcctgcggatgtgcggctcctcgacg
cccgagtacatccacgacgacgccctggcctcctcgaccacccccgtcttccgcaccaac
cgcgacgcgatcgtcctcaacgacacgacgatcggcaccgtgtggctgcccgaccagaac
ctcgcccaggccgacgagtggaccgagaactccgggcactccagtgacgacgccaccccg
gacgagaacgccaaggacaccaccgaggacccggcccagacgcccgaccgcgatgaggag
aacccgccggacgccgtcgacgactccttcggggtgcgcgccgggcgcacgacgatcctc
cccgtcctggccaacgactccgatcccgacggcgatgtcctcaccgccgtcccgggcgat
gccggctcgacggcgacggtgacccaggtccagggcggcttggccctggcgatcaacgtc
cccgcgggcgcgaccgggacgatcaccgtgccctacacggccgacgatgggcgcggcatg
tccgactccgccgtcgccacggtgacgatccgccccgattcggagaactccgcacccgag
cagcaggccgcccagaccctcaagctcgccgagggcggcacggactcgatctccgtcctg
tccaactggcgcgaccccgacggcgacgacctgcacctggtgtccgccaccggcgtcggg
ctggagacccgcaccacccccgagggactgctcaccgtcaccgagctgaccggcggcacg
gggccgcgcgagatgacgctcatcgtctccgacgggcggaccaccgcggagggctcgatg
acggtcgacgtcgtcccggcagccgacgccgtgccggccacccacgcggaccacgcccgc
ggcgtcgtcgggcagcaggtgacgatctccccgctggccaacgactcctcgccgacctcc
acgcccctgcgcctcggctcgatcagcgagccgcccacgggcacgaccgccacgaaggac
caggccgcgggcactgtcaccttcaccgcccagagcgcgggcacctactacctcgactac
gaggcctccgacggcacctccctggccaaggggctcatccgcgtggacatcgccgaggcc
tcggatccctcggcggcgcccatcgtggaggacgacaccgtcttcctcgccccgggcggc
tcagtgaccgtcaatcccctggccaatgactccgaccccgccggaggagtgctcgtggcc
gtctccgcgaccacgccgcccgcctccggggtgagcgcgaccgtcgtcgaccactccctc
atgcagatctccgcggtcggcgagctccagggcaagacgacggccgagtacacggtctcc
aacggcacgaccacggccaccggcacgatcaccatcgtccccctgcccgactcggcctcc
cagccgccgatcggcgtcaatgacacggccgtggtgcgcgccggcgacatcgttaccgtg
ccggtcctcgagaacgacgcctccccctcggggctgtccctgaccaccaccggcgagctc
aacatcccggacgactctctgggcaccgcctggatcaaccaggacaagctgcgcgtcaag
gccgggcagacccccggcaccatggagatgtcctacacggtgcaggactccgccggacag
accgccaccgccaccgccgcgatcgaggtccgcgagcgcaacgacgcggcgaacgccgcc
ccggagccccgcccggtcaccgcggccaccatcgccggcaaggaggtctcgatgacggta
cccctggaccgcatcgaccccgacggcgactccgtgaccctcaccggcctggcgacccag
cccaccaagggcagcgtcgaggtcaagggcaacgtgctcgtctacaccgccttcgagggc
tccagcggcaccgactccttcacctacacggtcaccgaccacctgggcgccacggccacg
ggcacggcgcgggtcggcatcgccgcccctgcggccgtcaacacgccgcccaagaccacc
gacgacctggtgaccgccaagcccggccgcaaggtgcgggtggacgtgaccgccaacgac
tgggactccgatgatgacccggtcaccctggccggcgagcccacgagcgaggacccggcc
ctgacggcgagtgccgtgaacggccaggtcgccctggagctgcccgaggcggagggcaac
tacaccgtccactacacggccaccgactcccgcgggggcaccgcgctgggtaccctcacg
gcgcaggtgcgcgccgacgccccgccgcaggcgcccatcgccgccgacgacgcggtgacc
ctgtccgacatcgacgcctcgggcacggccctcgtggacgtgctcaagaacgactccgac
cccgatgggagcccggagacgctcaccgtgtccgcctcggacccgaacgccgcggtggag
ggcaatgccctgcgggtgacggtcaccgacagcgcgcagctcatcctctacacggtcacc
gaccccgacggcctcacgggccaggcggtggtctccgtgcccgcctcctcggacctggtc
ccgcagatcaacccctcgaccaccccggtgaggatccccgcggacacgaccacctccatc
cccctggcctcccacgtcctcacccgctcggggacctcgcccgtcatcggggacgagtcc
tcgatcacggccggggccgggctgtcctcggccggcgcggagggcaacggctcgctgtcc
gtgacgccctcctcgggcttcacggggcagacctccgtgtccctcaccgtggccgatggg
acggatgacggggcgctcagcgccgcgctgagcctgccgatcctcgtggagtcgacggag
aaccgcgcccccacgttcatcccgacggccgtgaccgtggcgcccaatgagactcccgtg
accgtggacctgtccgccatggccaccgaccccgacggcgatgccctcaccttcacgatc
ggctcggcgtcggccggcttcacggcctcccagtccgggtccagcgtgacggtgggcgcg
gacgccgccacggcggccggcacgacgggctccctgccggtgaccgtctccgacggcaag
aacccggaggtgtcggcgagcctgccgctggcggcgagcgcctcgacccgcccgcgcatg
acgacgacgccggcgacgctgagctccaacggcgaggcggtgaccgtggacgtgagcgcc
tacgtgtccaaccccttcccggaccagggcatcaccctgtccggcacccccaccatcacc
tcggggcagggctcggtgagcgcctcgggcacctcgctgacgatcacgccgtcggccggg
gccacgggcgacatcgtggtccgctaccaggtactcgacgccacgggcgccgcggaccgc
gccgccaccggcacggtgaccgtcaccgtggcctccgcgccctccgcgcccacacaggtg
gcggccgaggcgcgcgactacggctccgccagggtgacgtggtccccgggcagcgccaac
gggagccccatcacgggctacaccctcaccgaggtgggcggcgcgggctcctggagctgc
acgggcagcccgtgctacgccacgggcctgaccgccggcaggtcctacaccttcgaggtg
acggccacgaacgccaacggcacctcgtccgcgggccgctccaacaccgtcaccctgggt
ccgtccgcgccgggcgcccccagcggcgtgcgcatccaggccggcgaggggaccctcacc
gcctcgtggaccccgggggccgccgtgccgggcacccagaccagctaccgggtggtcttc
cactccgacgatggcgacatcacccgcacgacgaccggcacctcgctcaccatcggcgcg
tccgacggcgtgcaggcgggcggctcctactccgtgacggtcacggccatcgcccgctcg
ggcggctcggaggtcggctcctccaagagcgccagctccggctcctcggcgacgccctac
ggcaagccgggatccttcgagatcacgagcgtcgtccagacgggctccggggtgacggtc
tcctggcagggggccagcccgaatcatgcgggcccggtctcctacacggtgagcgtcacc
ggcccgcagtcccgcacggtccacgcgggttccgccctgtcgtcctcgatcagcctctcg
gcgtcgggcacctacaccttcagcgtgagggcgacgacgagggccggctcgacggactcc
tcgaacaccaagagcatcaacctcgacctgcgctccaagcccccggcccccacggggcta
tccgccagcccgacgcacgtcgaggggcagatctccgtctccgcgagccctcaggcaggc
aatggctggagcgctggcgatctcacccccgagttccgcgtcaacggcagcgactggggc
acgagaaagaccttcagcaacctccccgccggtcagaacgtgaccgtggaggctcgcgtc
tacggcactcgtcaggatggcagcacggtctactccgacgtcgtaacgacctccgtgacc
gcaatcggctcaccggggcgtcccgatgtcgagtgccggctcaaccaggccacggggtgg
atggactgctgggtggttcattggtcgtattacacgggcggggatccgtccctctcctac
accagttacgaggccgatgcccacgagaatcgcaccggtccgattcaggaccccgcccag
ccgtcattcggaaagcagttgtccgatggccagactctcggctggtgtgttgaggcgagg
aacagctacggcttcaagagttgggactgcgagagcaagacctggaacaagccggagcag
ccgaagcaggagaaccaggcgaagccagacgggcagtaccaggtcctgccgatccagacc
acgagcccggacgccgtctgcaccgcgagtgacctggccaagtccggctactccgcgggc
ggctgctggcgcgtcgtcctggacttctcggtcttccccccggggacgccgctcctgtgc
aacttcgatgataccaatgtctggccgtcaagcgctccctactacgcattccggaactcc
aaccactctccggaatggcgcagcgtgaccctgacaaataatcccaacctgaccgtcacc
tgcgaagtcacgaccgggtga
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