Actinoplanes sp. OR16: ACTI_03420
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Entry
ACTI_03420 CDS
T10317
Symbol
recQ_1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acte Actinoplanes sp. OR16
Pathway
acte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACTI_03420 (recQ_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acte03019
]
ACTI_03420 (recQ_1)
03400 DNA repair and recombination proteins [BR:
acte03400
]
ACTI_03420 (recQ_1)
Enzymes [BR:
acte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACTI_03420 (recQ_1)
Messenger RNA biogenesis [BR:
acte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACTI_03420 (recQ_1)
DNA repair and recombination proteins [BR:
acte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACTI_03420 (recQ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
PcrA_UvrD_tudor
HEM4
Motif
Other DBs
NCBI-ProteinID:
BBH63657
UniProt:
A0A3T1ALG2
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All DBs
Position
378187..379824
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AA seq
545 aa
AA seq
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MKLPIYGPRLRKVARNHFGWPSLRPGQFKPMRAVLRRKDALVVLPTGAGKSAIYQIPAVL
LPGPTVVISPLLALQQDQIAALNERDDPKTRAVRVSSAETPAQQREAIEEIRTGRAEFLF
ITPEQLSDPDRLAEVRALKPGLVAVDEAHCISAWGHDFRPDYLALGEMIKQIGRPPILAL
TATASPPVREDIIERLHLKNPEIHVSGLDRRNLFLEVAYCPDEAYRWRRLTAMLDAEQRP
GIIYVPTRRSAEELAGKLTEAGYDAEFYHGGMASGIREQRHRDFSDDKIDIMVATSAFGM
GIDKPNIRWVAHVALPDSPDSYFQEIGRAGRDGEPGRTVLLWRSEDEALQRFFTGGSPDV
EELTALAAELHKGPQTKTALQKATGLGPRKIGQLLGLLEQVGAVRTGAGNKLSVPARAPL
PPAAAEAAVAEHERQQAVMKTRTDMMRAFAQSRQCRTETLLAYFGEDIQRQCGHCDNCAD
GSAAEVDAAEEEGPFPVHSHVRHGEWGTGMVMNYEEERMTVLFDTVGYKTLSVPVVVEQN
LLTAA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccccatctacgggccccggctgcgcaaggtcgcccgcaaccacttcggatgg
ccgtcgctgcggccgggccagttcaagccgatgcgtgcggtgctgcgccggaaggacgcg
ctggtggtcctgccgaccggtgccggcaagtcggcgatctaccagatcccggccgtgctg
ctgcccggcccgaccgtggtcatctcgccgctgctcgccctgcagcaggaccagatcgcc
gccctcaacgagcgggacgacccgaagacccgcgcggtccgggtcagctccgccgagacg
ccggcccagcagcgggaggcgatcgaggagatccggaccggccgggccgagttcctcttc
atcaccccggagcagctgagcgacccggaccggctcgccgaggtgcgggccctcaagccc
ggtctcgtggcggtcgacgaggcgcactgcatctcggcctggggacacgacttccggccg
gactacctcgcgctcggcgagatgatcaaacagatcggccgcccgccgatcctggcgctc
accgcgaccgcgtcgccgccggtccgcgaggacatcatcgagcgcctgcacctgaagaac
ccggagatccacgtgtccgggctggaccggcgcaacctcttcctggaggtggcgtactgc
ccggacgaggcctaccggtggcggcggctcaccgcgatgctcgacgccgagcagcggccc
ggcatcatctacgtgccgacccggcgcagcgccgaggagctggccggcaaactcaccgag
gccgggtacgacgccgagttctaccacggcggcatggcctccgggatccgcgagcagcgg
caccgcgacttcagcgacgacaagatcgacatcatggtcgcgacgtcggcgttcggcatg
ggcatcgacaagccgaacatccgctgggtggcgcacgtggcgctgccggactcgccggac
agctacttccaggagatcggccgggccgggcgggacggcgaaccgggccggaccgtgctg
ctctggcgctccgaggacgaggccctgcagcgcttcttcaccggcggctcgccggacgtc
gaggaactgaccgctctcgccgccgagctgcacaagggcccgcagacgaagaccgcgctg
cagaaggcgaccggcctgggcccgcgcaagatcggccagctgctgggcctgctggaacag
gtgggcgcggtgcggaccggcgccggcaacaagctctcggtcccggcccgcgcgccgctc
ccgcccgccgcggccgaggctgccgtcgccgagcacgagcgccagcaggcggtcatgaag
acgcgaactgacatgatgcgcgccttcgcacaatcccggcagtgccggacggagacgctg
ctcgcctacttcggcgaggacatccagcgccagtgcggccactgcgacaactgcgccgac
ggcagcgccgccgaagtcgacgcggccgaggaggagggcccgttcccggtgcacagccac
gtccggcacggcgagtggggcaccggcatggtgatgaactacgaggaggagcggatgacg
gtcctcttcgacacggtcggctacaagaccctctccgtcccggtggtggtcgagcagaac
ctgctgacggcggcctga
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