Actinoplanes sp. OR16: ACTI_04460
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Entry
ACTI_04460 CDS
T10317
Symbol
fliA
Name
(GenBank) DNA-directed RNA polymerase sigma-70 factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
acte Actinoplanes sp. OR16
Pathway
acte02020
Two-component system
acte02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
acte00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACTI_04460 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACTI_04460 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acte03021
]
ACTI_04460 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
acte02035
]
ACTI_04460 (fliA)
Transcription machinery [BR:
acte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACTI_04460 (fliA)
Bacterial motility proteins [BR:
acte02035
]
Flagellar system
Flagellar assembly proteins
Stator
ACTI_04460 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_Tnp_ISL3
HTH_23
KORA
NirdL-like_HTH
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BBH63761
LinkDB
All DBs
Position
complement(489232..490089)
Genome browser
AA seq
285 aa
AA seq
DB search
MTGEAPATERRGEDIVRKNMPLVGHLVREMLTRVPSHVNRDDLLSAGYAALVAAARGFDP
ERGVPFPRFAATRIRGALVDELRGLDWASRSVRQRARRTDSAKEELMAELGRTPTVQEVA
ERLGCTVEDIEAAQDDVARATVFSLQGFATATADDIVTEPGAGPEDLLLRRERLGYLRDA
VEVLPERLRVVVRGYFFEERPMAQIAAELGVSESRVSQLRAEALVLLRDGLNTHLEPGLA
AQNPLKEGCVARRRAAYYDKIATRGTLRTRLEMTSPEGLPVGSAA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtgaggcacccgctacggagaggcgtggcgaagacatcgtgcggaagaacatg
cccctcgtcgggcatctggtccgggagatgctgacccgggtcccttcgcacgtgaaccgc
gacgacctgctctccgccggatacgcggccctggtggcggcggcccgtggcttcgacccc
gagcgaggcgtgccgttcccccggttcgcggcgacccggatccgtggcgccctggtggac
gagctgcgcggtctcgactgggccagccgctcggtgcggcagcgggcccggcgtaccgac
tcggcgaaggaggagctgatggccgagctgggccggacgcccaccgtgcaggaggtggcg
gagcggctcggctgcacggtcgaggacatcgaggccgcccaggacgacgtggcccgggcg
accgtcttcagcctgcagggcttcgccacggcgacggccgacgacatcgtcaccgagccg
ggcgccggcccggaggatctgctgctgcgccgggagcggctcggctacctgcgcgacgcc
gtggaggtgctgccggagcggctgcgcgtggtggtgcgcggctacttcttcgaggagcgg
ccgatggcgcagatcgccgccgagctgggcgtcagcgagtcgcgcgtgtcacagctgcgg
gcggaggcgctggtgctgctgcgcgacgggctgaacacgcacctggagccggggctggcg
gcgcagaacccgctgaaggagggctgtgtggcccggcgccgggcggcctactacgacaag
atcgccacacgcggcacgctgcggacccggctggagatgacgagtccggagggcctgccg
gtcggcagtgccgcatag
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