Actinoplanes sp. OR16: ACTI_04650
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Entry
ACTI_04650 CDS
T10317
Symbol
gyrB_1
Name
(GenBank) DNA topoisomerase
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
acte Actinoplanes sp. OR16
Brite
KEGG Orthology (KO) [BR:
acte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acte03032
]
ACTI_04650 (gyrB_1)
03400 DNA repair and recombination proteins [BR:
acte03400
]
ACTI_04650 (gyrB_1)
Enzymes [BR:
acte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACTI_04650 (gyrB_1)
DNA replication proteins [BR:
acte03032
]
Prokaryotic type
DNA Topoisomerases
ACTI_04650 (gyrB_1)
DNA repair and recombination proteins [BR:
acte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACTI_04650 (gyrB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
BBH63780
UniProt:
A0A3T1ALW9
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All DBs
Position
complement(512762..514843)
Genome browser
AA seq
693 aa
AA seq
DB search
MADREYCLVTAQPETLYGADDLTHLEGLDAVRKRPGMYIGSTDSRGINHLANEIIDNCTD
EGVAEYATKIAVTLHSDGSVQVDDDGRGIPTDVHAKSGLSGVELVLTRLHAGGKFGGSGY
KTSGGLHGVGASAVNALSLRFDVTVKRDGKVHEISFQRGVPGVFDGPGPDAAFTREPGLR
VARRMKRGEPTGTSIRYWYDARYFETGAGLDVEAVRTKLRNTAFLVPGVQYTLFDAKAEE
PATETFHYPNGLVDMVEFLTPSGDKPVSGILMVNGEGTYKENAADANGVMQSNVVRHAQI
EVAFRWGTGYERTVESFTNTIRNVHGGTHRKGFERALVRSLTEAIRNTRGLLKPKEEPPV
LDDLLEGMTAVIHVRVPEPQFTSQTKDELSTAGVTRVMQGLVEAYVKEWIDNRKTKSEAR
TVLQKVVDAARVRLTQKQQKDAARRKTALEGASMPAKLVDCRAIGIDRSELFIVEGDSAL
GTARMARSSEYQALLPIRGKILNVQKASLQQVLDNAECSAIVQVLGAGSGRTFEIGQMRY
GRVMIMADADVDGSHIRTLLITLFAKYMRPVIEHGRLFAAMPPLHKVVTKGRNSETLYTY
TQQEMESTVSRIERDGRQVQKPVPRFKGLGEMDADELWETTMNPAARTVRRITIEDAERA
EATLELLMGERVEPRKNWLIEAAGRIDQETIDA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcgggagtactgcctcgtgaccgcacagccagagaccttgtatggggctgac
gacctcacgcacctcgaagggctggatgctgtccgcaaacgcccgggtatgtacatcggg
tcgacggacagccggggcatcaaccacctcgccaacgagatcatcgacaactgcaccgac
gagggtgtggcggaatacgccaccaagatcgcggtgaccctgcactcggacggctcggtg
caggtcgacgacgacggccgcggcatcccgaccgacgtgcacgccaagtccggcctctcc
ggcgtcgagctggtgctgacccggctgcacgccggcggcaagttcggcggctcgggctac
aagacctccggtggtctgcacggtgtcggcgcctccgcggtgaacgcgctgtccctgcgc
ttcgacgtcacggtgaagcgcgacggcaaggtccacgagatctcgttccagcgcggcgtg
ccgggcgtcttcgacggtcccggccccgacgcggccttcacccgcgagcccggcctgcgg
gtggcgcggcggatgaagcgaggcgagcccaccggtacgtcgatccgctactggtacgac
gcccgttacttcgagaccggcgccgggctcgacgtcgaggccgtgcgcaccaagctgcgc
aacaccgccttcctcgtccccggcgtccagtacacgctcttcgacgcgaaggccgaggag
ccggccaccgagaccttccactaccccaacggtctcgtcgacatggtcgagttcctcacc
ccgtcgggtgacaagccggtctccggcatcctgatggtcaacggcgaggggacctacaag
gagaacgccgccgacgccaacggcgtgatgcagtcgaacgtggtccgccacgcccagatc
gaggtcgccttccgctggggcacgggctacgagcgcaccgtcgagtcgttcaccaacacg
atccgcaacgtgcacggcggcacccaccgcaagggcttcgagcgggcgctggtgcggtcg
ctcaccgaggcgatccgcaacacccgcggcctgctcaagcccaaggaggagccgccggtc
ctggacgatctgctcgaaggcatgaccgcggtcatccacgtgcgggtcccggagccgcag
ttcacctcgcagacgaaggacgagctctccacggccggtgtcacccgggtgatgcagggg
ctcgtcgaggcatacgtcaaagagtggatcgacaaccggaagaccaagtccgaggcgcgc
acggtcctgcagaaggtcgtcgacgccgcgcgcgtccgcctcacgcagaagcagcagaag
gacgccgcccggcgcaagaccgctctcgagggcgcgtcgatgccggccaagctggtcgac
tgccgggccatcggcatcgaccgctccgagctgttcatcgtggagggcgactcggccctc
ggcaccgcccggatggcgcggagctcggaataccaagcgctgctgccgatccgcggcaag
atcctcaacgtgcagaaggcaagcctgcagcaggtgctcgacaacgccgagtgctcggcg
atcgtgcaggtgctcggcgcgggctccggccggacgttcgagatcggccagatgcgctac
ggccgcgtcatgatcatggcggacgccgacgtcgacggctcgcacatccggacgctgctg
atcaccctcttcgcgaagtacatgcgaccggtgatcgagcacggccggctcttcgccgcg
atgccgccgctgcacaaggtggtgacgaagggccgcaactccgagacgctctacacctat
acccagcaggagatggagagcaccgtcagccgcatcgagcgcgacggccgccaggtgcag
aaacccgtcccccgattcaagggtctcggtgagatggacgccgacgagctctgggagacc
acgatgaacccggccgcccgtaccgtccggcggatcaccatcgaggacgccgagcgcgcc
gaggccaccctcgaactgctcatgggtgagcgtgtcgaaccccgcaagaactggttgatc
gaggccgccggccggatcgaccaggagacgatcgacgcctga
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