Actinoplanes sp. OR16: ACTI_12310
Help
Entry
ACTI_12310 CDS
T10317
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
acte Actinoplanes sp. OR16
Pathway
acte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACTI_12310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acte03021
]
ACTI_12310
03019 Messenger RNA biogenesis [BR:
acte03019
]
ACTI_12310
Transcription machinery [BR:
acte03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACTI_12310
Messenger RNA biogenesis [BR:
acte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACTI_12310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
VWA_2
PIP5K
Motif
Other DBs
NCBI-ProteinID:
BBH64546
LinkDB
All DBs
Position
complement(1353238..1355559)
Genome browser
AA seq
773 aa
AA seq
DB search
MSDTTDVTSGVSDVADGAGTTATATKRRRGGTGLSAMLLPELQSLAASLGISGTARMRKG
ELIAAITERQSGGGAAAEPAPRPRTNGSEAVATAPAQAQAPAAQAAAAQAPAAQAPAAQA
ATAQAPATSAQAPAASAAPAQAAPAEKPQTAAAPAEKAERPTRRSRERVSRDSAARETPR
ETAEAAPAAAPATAPAAAAPAEAPAAVAVATAPAETTERAERGDRPERGERNRDRQRNQR
DGGRDGGRESGRDGGRESGRDGGRESGRDGGRDGQRDGGRDGLRDSGRDGQRDGGRDGLR
DGGRDGQRDGGRDSGPRDGQRDQRDRNDDRAPRSDQGRGDQGHDDDGDDADGGRRSRRSR
FRDRRRGRDRDDDGGGNSRQRDGGRESREPHVADDEVLVPVAGILDVLDNYAFVRTTGYL
SGPNDVYVSMSQVKKYGLRRGDAVTGAVRSAPRDTGEQRRDKYNPLVRLDTINGMEPEEA
RRRPEFYKLTPLYPQERLRLETEPHILTTRVIDLVMPIGKGQRALIVSPPKAGKTMVLQA
IANAITHNNPECHLMVVLVDERPEEVTDMQRSVKGEVIAATFDRPPQDHTTVAELAIERA
KRLVELGHDVVVLLDSVTRLGRSYNLAAPASGRIMSGGIDSTALYPPKRFLGAARNIENG
GSLTILATALVETGSMMDTVIFEEFKGTGNAELKLDRKIADKRVFPAVDVSASGTRKEEI
LMGKEELAIVHKLRKVLSSLESGAALDLLLDRLKQSRTNIEFLMQIAKSTPGE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgacgtgacgtcgggtgtttctgacgtcgctgacggcgccggcacc
accgcgaccgccacgaagcgccgccgcggcggcaccgggctgtccgcgatgctgctgccc
gagttgcagagcctcgccgcttccctcggcatctccggcaccgcccggatgcgcaagggc
gagctgatcgccgcgatcaccgagcgccagagcggtggcggcgctgccgccgagccggcg
ccccgtccgcgtaccaacggctccgaggccgtcgccacggctcccgcccaggctcaggcc
cccgccgcccaggccgcggcagcccaggccccggcagcccaggccccggcggctcaggcc
gcgaccgcccaggccccggccacttcggctcaggccccggccgcctcggccgctccggct
caggccgctccggcggagaagccgcaaaccgcagccgcccccgccgagaaggccgagcgt
ccgacgcgccgcagccgtgagcgggtctcccgtgactcggccgcccgcgagacccctcgc
gagaccgcagaggccgccccggctgccgcacccgccaccgcgcccgctgctgcggctccc
gccgaggcgccggccgccgtcgcggtggcgacggctccggccgagaccaccgagcgtgcc
gagcggggcgaccgtcccgagcggggcgagcgcaaccgtgaccggcagcgcaaccagcgc
gacggcggtcgtgacggcggccgtgaaagcggtcgtgacggcggccgtgaaagcggtcgt
gacggcggccgtgaaagcggtcgtgacggcggtcgtgatggccagcgcgacggcggtcgt
gacggtctgcgtgacagcggccgtgacggacagcgcgacggcggtcgtgacggtctgcgc
gacggcggtcgtgacggccagcgtgacggtggtcgcgacagcggcccgcgtgacgggcag
cgcgaccagcgtgaccgcaacgacgaccgggcgccgcgctccgaccagggccgtggcgac
caggggcacgacgacgacggtgacgacgccgatggcggacgccggagccggcgcagccgc
ttccgggaccgccgccgtggccgggaccgcgacgacgacggcggcggtaacagccgccag
cgtgacggcggccgggagagccgggagccgcacgtcgcggacgacgaggtcctggtcccg
gtggccggcatcctcgacgtcctcgacaactacgcgttcgtccggaccaccggttacctc
tccgggccgaacgacgtctacgtgtcgatgtcgcaggtgaagaagtacggcctgcgccgc
ggtgacgcggtcaccggcgcggtgcggtccgccccccgtgacaccggtgagcagcgccgg
gacaagtacaacccgctcgtccgcctcgacaccatcaacgggatggagcccgaggaggcg
cgccggcgtcccgagttctacaagctcaccccgctctacccgcaggagcgcctgcggctg
gagaccgagccgcacatcctcaccacgcgcgtcatcgacctcgtcatgccgatcggcaag
ggccagcgtgcgctgatcgtctccccgccgaaggccggtaagacgatggtgctgcaggcg
atcgccaacgcgatcacgcacaacaaccccgagtgccacctcatggtcgtgctcgtggac
gagcgtcccgaagaggtcaccgacatgcagcggtcggtgaagggcgaggtcatcgcggcc
acgttcgaccggccgccgcaggaccacaccacggtcgccgagctggcgatcgagcgggcc
aagcgcctcgtcgagctcggccacgacgtggtcgtcctgctcgactcggtgacacggctc
ggccggtcgtacaacctggcggcgccggcctccggccgcatcatgtccggtggtatcgac
tcgaccgccctctacccgccgaagcggttcctgggcgcggcgcgcaacatcgagaacggt
ggctcgctcaccatcctcgcgacggcgctggtcgagaccggctcgatgatggacacggtg
atcttcgaagagttcaagggcacgggtaacgccgagctcaagctcgaccgcaagatcgcg
gacaagcgggtcttcccggccgtcgacgtctccgcctccggtacccggaaggaagagatc
ctcatgggcaaggaggagctcgcgatcgtccacaagctccgcaaggtgctcagctccctg
gagtcgggcgctgctctggacctcctgctggaccggctcaagcagagccgtaccaacatc
gagttcctgatgcagatcgccaagtcgacgcctggcgagtaa
DBGET
integrated database retrieval system
