Actinoplanes sp. OR16: ACTI_24080
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Entry
ACTI_24080 CDS
T10317
Symbol
topA_1
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acte Actinoplanes sp. OR16
Brite
KEGG Orthology (KO) [BR:
acte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acte03032
]
ACTI_24080 (topA_1)
03400 DNA repair and recombination proteins [BR:
acte03400
]
ACTI_24080 (topA_1)
Enzymes [BR:
acte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ACTI_24080 (topA_1)
DNA replication proteins [BR:
acte03032
]
Prokaryotic type
DNA Topoisomerases
ACTI_24080 (topA_1)
DNA repair and recombination proteins [BR:
acte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACTI_24080 (topA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
MarR_2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BBH65723
UniProt:
A0A3T1ASB1
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All DBs
Position
2610646..2613456
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AA seq
936 aa
AA seq
DB search
MPSNARTTRLVIVESPSKAKTIAGYLGPDYFVEASFGHVRDLPRNAADVPAKYKDEAWAR
LGVDVDNGFKALYVVSQDRKAQIAKLVKLSKEVDEIFLATDEDREGEAIAWHLVETIKPK
VPVKRMVFHEITKPAIQAAVANPREIDRSLVDAQEARRILDRLYGYEVSPVLWKKVMPKL
SAGRVQSVATRIVVERERQRMAFRSAEYWDILASLAVQGPTEGARSFQATLIALDGDRVA
TGKDFEPTTGQVKPGAGVVHLDESGARGLAARLEGRPFTVTRVEEKPYRRRPYAPFITST
LQQEAARKLRFSASQTMRTAQKLYENGYITYMRTDSVNLSETAIAAARRQIAELYGANNV
PPQPRRYTTKAKNAQEAHEAIRPAGDNFRTPGEVAKELSTDEFKLYELIWRRTIASQMTD
AVGNSVSVRIRAISTTNEEVDFSSSGKTITDPGFLRAYVESSDDETAEAEDAERRLPNLV
KDQPLTADELAAVGHHTSPPARYTEASLVKALEELGIGRPSTYESIMRTIQDRGYVEKRG
QAMIPSFLAFAVIGLLEGHYPRLVDYNFTASMETQLDDIAGGDHAATDFLTSFYFGSQTP
GADDAIAKAGGLKKMVTDNLSAIDARAVNSIPLFDDEQGRNVVVRVGRYGPYLQRQAPGA
EEESPGDRASIPEGVAPDELTPEKVDELFLGGGGERSLGDDPATGESVQLKSGRFGPYVQ
SGERKASLLKTQAPDSLTLEQALKLLELPRIVGKDPDGNEIVANNGRFGPYVKRGEDFRS
LESEDQLFTVTLDEALALLAAPKTRQRRAAKPPLREMGNDPATEKPMVIKEGRFGPYVTD
GEYNASLRRGQTPEELTVEQASEMLAEKRAKGPAPKKTAKKAPAKKAADGATPAKKTPAK
KAPAKKATAAKKATPAKKAAPAKKAAPRKAAASTSE
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagtaacgccaggacgacccgtctggtcatcgtcgagtccccgtcgaaggccaag
acgatcgccggttacctgggccccgactacttcgtcgaggcctccttcggccatgtccgt
gatctgccgcgcaacgccgcggacgtccccgcgaagtacaaggacgaggcctgggcccgg
ctcggcgtcgacgtcgacaacggcttcaaggctctttacgtggtctcccaggaccgcaag
gcccagatcgccaaactcgtgaagttgtcgaaagaggtggacgagatcttcctcgccacc
gatgaggaccgcgagggcgaggccatcgcctggcacctggtcgagacgatcaagcccaag
gtgccggtcaagcggatggtcttccacgagatcaccaagccggccatccaggccgccgtg
gcgaacccgcgcgagatcgaccgttccctggtggacgctcaggaggcacgccgcatcctg
gaccggctctacggctacgaggtcagcccggtcctgtggaagaaggtgatgccgaagctc
tccgcagggcgtgtgcagtcggtcgccacccgcatcgtggtcgagcgcgagcggcagcgc
atggcgttccgctccgctgagtactgggacatcctcgcctccctcgccgtgcagggcccg
accgagggcgctcgcagcttccaggccacgctgatcgcgctggacggcgaccgcgtcgcc
accggcaaggacttcgagcccaccaccggccaggtcaagccgggcgccggtgtggtgcac
ctggacgagagcggcgcccgcgggctggccgcccgtctggagggccggccgttcaccgtc
acccgggtggaggagaagccgtaccgccgccggccgtacgcgcccttcatcacctcgacg
ctgcagcaggaagcggcccgcaagctgcggttctccgcctcgcagacgatgcgcaccgcg
cagaagctgtacgagaacggatacatcacctacatgcgtaccgactcggtgaacctctcc
gagacggccatcgccgcagcccgccgccagatcgccgagctgtacggggcgaacaacgtg
ccgccgcagccccgtcgctacacgacgaaggcgaagaacgcccaggaggcgcacgaggcg
atccggcccgccggcgacaacttccggaccccgggagaggtcgccaaggagctgagcacc
gacgagttcaagctctacgagctgatctggcgccggaccatcgcgtcgcagatgaccgac
gcggtcggcaactcggtctcggtgcggatccgggcgatctccacgacgaacgaggaggtc
gacttctcgtcctccggcaagaccatcaccgacccgggcttcctgcgcgcctatgtggag
tcgtccgacgacgagaccgccgaggccgaggacgccgagcgccgcctgcccaacctggtg
aaggaccagccgctgaccgccgacgagctcgccgcggtcggccaccacacctcgccgccg
gcccgctacaccgaggcctcgctggtgaaggcgctggaggagctgggcatcggccgcccg
tcgacctacgagtcgatcatgcggaccatccaggaccgggggtatgtggagaagcgcggc
caggcgatgatcccgtcgttcctggcgttcgcggtgatcggcctgctcgaggggcactac
ccacggctcgtcgactacaacttcacggcctcgatggagacgcagctcgacgacatcgcc
ggcggcgaccacgcggcgacggacttcctcacctcgttctacttcggcagccagacgccc
ggcgcggacgacgcgatcgcgaaggccggcggcctgaagaagatggtcaccgacaacctg
agcgcgatcgacgcccgggcggtcaactccatcccgctcttcgacgacgagcagggccgc
aacgtggtcgtgcgcgtcggccgctacgggccctacctgcagcgtcaggcgcccggtgcg
gaggaggagtcgcccggcgaccgggcctccatcccggagggcgtggcgcccgacgagctc
accccggagaaggtggacgagctcttcctcggcggtggcggcgagcgcagcctgggcgac
gacccggcgaccggcgagtcggtgcagctcaagtccggccgcttcgggccgtacgtgcag
agtggtgagcgcaaggcgtcgctgctcaagacgcaggcgccggactcgctcaccctcgag
caggcgctgaagctgctggagctgccgcggatcgtcggcaaggaccccgacggcaacgag
atcgtcgcgaacaacgggcggttcgggccgtacgtgaaacgtggcgaggacttccgctcg
ctggagtccgaggatcagctcttcaccgtcaccctggacgaggcgctggccctgctggcg
gcgccgaagacccgtcagcgccgggctgcgaagccgccgctgcgcgagatgggcaacgac
ccggcgaccgagaagccgatggtcatcaaggagggccgcttcggtccgtacgtgaccgac
ggcgagtacaacgcctccctgcggcgcggtcagacgccggaggagctcaccgtcgagcag
gcgtccgagatgctcgccgagaagcgggcgaagggcccggccccgaagaagacggcgaag
aaggctcccgccaagaaggccgccgacggcgcgacgcctgccaagaagacgccggccaag
aaggcgcccgccaagaaggccacggccgcgaagaaggccaccccggccaagaaggccgca
cccgcgaagaaggcggcgccccgcaaggccgccgcctccacctcggagtga
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