Actinoplanes sp. OR16: ACTI_26740
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Entry
ACTI_26740 CDS
T10317
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acte Actinoplanes sp. OR16
Pathway
acte03020
RNA polymerase
Brite
Enzymes [BR:
acte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACTI_26740 (rpoC)
Transcription machinery [BR:
acte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACTI_26740 (rpoC)
DNA repair and recombination proteins [BR:
acte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACTI_26740 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BBH65989
UniProt:
A0A3T1AT21
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All DBs
Position
2897897..2901787
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAASVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDAEARHRDMSTIENEIFAEKRQSENGRDSEIEKRAAKLEQD
LAELEAEGAKADVRRKVKEAGEREMRQIRDKAQREIDRLDEVLDTFRKLDSKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALLENMDLDAEAENLREIIRTGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPRLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHLTAGAKGEGR
VFSSDAEARMAYDNGELHLQAPIKLRLRDVIGVDNGAKGEKWEAPEDWTEGEPVLVETTL
GRVIFNETLPVGYRYVNYEIRKGQLSAIVNDLAERFPKVVLAATLDALKEAGFHWATWSG
VTIGMGDVIGPPRKPEILARYQVEADRIDKQYQRGLMTAEERRGELIEIWTKATNEISKE
METALPQENPLWVMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPITSSYREGLTVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERAIPMQVSEREPDG
TLVVHTHAETGVHARTLADDIDDANGNRVVSRGDDLNSIMVDALVAAGVETVRVRSVLTC
ESKLGVCAACYGRSLPTGKAVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQG
LPRVQEIFEARVPKGKAPIADTPGRVRIEDGERSRKIIVVPDDGSEEIVYDKISKRVKLR
IPDGGHVGVGEKLTEGTIDPHELLRIMGPRAVQVHLTSEVQEVYRSQGVLIHDKHIEIII
RQMLKRVTVIDSGAAEFLPGILVDRALFESENRRIVGEGGEPAAGRPVLMGITKASLATD
SWLSAASFQETTRVLTDAAINSRSDSLVGLKENVIIGKLIPAGTGISKYRNIRVEPTEEA
KAKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagttgcgcatcggccttgctaccgctgacgacatc
cggcagtggtcgcacggcgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggcaagtacaagcgggtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgactcggtccaaggtccgccgtgagcgcatgggtcacatcgagctggccgcgtcg
gtgacccacatctggtacttcaagggcgttccgagccggctgggctacctgctggacctc
gcccccaaggacctcgagaagatcatttacttcgcttcgtacgtcgtgacgagcgttgac
gccgaggcgcgtcaccgcgacatgtccacgatcgagaacgagatcttcgccgagaagcgc
cagtccgagaacggccgcgactccgagatcgagaagcgggccgccaagctggagcaggac
ctcgccgagctcgaggccgagggcgccaaggccgacgtgcgccgcaaggtcaaggaagcc
ggcgagcgcgagatgcgccagatccgcgacaaggcgcagcgcgagatcgaccggctcgac
gaggtgctggacaccttccgcaagctcgactccaagcagctggtcaccgacgagctgctc
taccgcgagctccgggaccgcttcggtgagtacttcaccggcggcatgggcgcggaggcc
atcaaggccctgctcgagaacatggacctggacgccgaggcggagaacctccgggagatc
atccgcaccggtaagggccagcggaagatccgggcgctcaagcggctcaaggtcgtggcg
gcgttcctgaacacccgcaactcgccgctcggcatggtgctggactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgccacgtccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggccggccggtcaccggtccgggtaaccgcccgctcaag
tcgctctccgacatgctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtggactactccggccgttccgtcatcgtcgtcggcccccggctcaagctgcaccag
tgcggcctgccgaagcagatggcgctggagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtcggccaagcggatggtcgagcgtcagcgc
ccggtcgtgtgggacgtgctggaggaggtcatcagcgagcaccccgtgctgctgaaccgt
gctccgaccctgcaccgcctcggcatccaggccttcgagccgcagctggtcgagggcaag
gccatccagatccacccgctcgtgtgtacggcgttcaacgccgacttcgacggtgaccag
atggcggtccacgtgccgctgtccgccgaggcccaggccgaggcgcggatcctgatgctg
tcgtcgaacaacatcctcaagccggccgacggcaagccggtcaccatgcccacccaggac
atggtcatcggtctgtaccacctgacccacctcacggcgggcgccaagggcgagggccgg
gtgttcagctcggacgccgaggcccggatggcgtacgacaacggcgagctgcacctgcag
gcgccgatcaagctgcgtctccgcgacgtcatcggtgtcgacaacggcgccaagggcgag
aagtgggaggctccggaggactggaccgagggcgaacccgtcctggtcgagaccaccctg
ggccgcgtgatcttcaacgagacgctgccggtcgggtaccggtacgtcaactacgagatc
cgcaagggtcagctgtcggcgatcgtcaacgacctcgccgagcgcttcccgaaggtcgtc
ctcgcggcgaccctggacgcgctcaaggaggccggcttccactgggccacctggtccggt
gtgacgatcggcatgggcgacgtcatcggtcctccgcgcaagccggagatcctggcccgc
taccaggtcgaggccgaccgcatcgacaagcagtaccagcgtggtctgatgaccgccgag
gagcgtcgcggcgagctcatcgagatctggaccaaggcgaccaacgagatctccaaggag
atggagaccgcgctgccgcaggagaacccgctctgggtgatgatcaactccggcgctcgc
ggtaacctgctccagctccggcagatcgccgcgatccgtggtctggtggccaaccccaag
ggtgagatcatcccgcggccgatcacctcgtcgtaccgcgagggtctgaccgtcctggag
tacttcatctccacccacggtgctcgcaagggtcttgccgacaccgcgctgcgtaccgcc
gactcgggttacctgacccgtcgtctggtggacgtgtcgcaggacgtcatcatccgcgag
gaggactgcggcaccgagcgcgcgatcccgatgcaggtgagcgagcgggagccggacggc
accctggtcgtgcacacgcacgcggagaccggtgtccacgcccgcacgctggccgacgac
atcgacgacgccaacggcaaccgtgtggtgtcgcgcggcgacgacctcaactcgatcatg
gtggacgcgctcgtcgcggccggcgtcgagacggtccgggtgcgcagcgtcctgacctgt
gagtcgaagctcggcgtctgcgcggcctgctacggccgttcgctgccgaccggcaaggcg
gtcgacatcggcgaggccgtcggcatcatcgcggctcagtccatcggtgagcccggcacg
cagctgacgatgcgtaccttccacaccggtggtgtcgcgggtgaggacatcacccagggt
ctgccgcgtgtccaggagatcttcgaggctcgcgtccccaagggcaaggcgcccatcgcc
gacaccccgggtcgcgtccgcatcgaggacggcgagcgctcgcgcaagatcatcgtggtg
ccggacgacggcagcgaggagatcgtgtacgacaagatctccaagcgcgtcaagctgcgc
atcccggacggcggccacgtcggcgtcggcgagaagctcaccgagggcaccatcgacccg
cacgagctgctgcgcatcatgggcccgcgcgcggtccaggtccacctgaccagtgaggtc
caggaggtctaccgctcgcagggtgtgctcatccacgacaagcacatcgagatcatcatc
cgccagatgctcaagcgggtgacggtcatcgactcgggcgccgcggagttcctccccggc
atcctggtcgaccgtgcgctgttcgagtcggagaaccgccggatcgtcggcgagggtggc
gagcccgccgccggccgtccggtgctgatgggtatcaccaaggcctcgctggccaccgac
tcgtggctctccgcggcctccttccaggagaccacccgggtgctcaccgacgctgcgatc
aactcgcgcagcgactcgctggtgggcctcaaggagaacgtcatcatcggtaagctcatc
ccggccggtaccggtatcagcaagtaccggaacatccgggtcgagccgaccgaggaggcc
aaggccaaggtgtactcgatgaccgggtaccccgagaccgactacggcttcgggccggcc
agtggccaggctgtgccgctggacgacttcgacttcgggtcgtaccgctaa
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