Actinoplanes sp. OR16: ACTI_32460
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Entry
ACTI_32460 CDS
T10317
Symbol
holA
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
acte Actinoplanes sp. OR16
Pathway
acte03030
DNA replication
acte03430
Mismatch repair
acte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACTI_32460 (holA)
03430 Mismatch repair
ACTI_32460 (holA)
03440 Homologous recombination
ACTI_32460 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acte03032
]
ACTI_32460 (holA)
03400 DNA repair and recombination proteins [BR:
acte03400
]
ACTI_32460 (holA)
Enzymes [BR:
acte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACTI_32460 (holA)
DNA replication proteins [BR:
acte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACTI_32460 (holA)
DNA repair and recombination proteins [BR:
acte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACTI_32460 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BBH66561
LinkDB
All DBs
Position
3512749..3513672
Genome browser
AA seq
307 aa
AA seq
DB search
MLSARAIAAAVEAARAADPGADVREYEAGSLAAGEVAEMLSPSLFGGRRVLVIRSGQDAR
KDLIAALLAYAKDPDPEVTLIVAHVGGAKGKAFADGLRAAGAEVVPAAKLKGDRERIAFV
RDEFRRNGAKCDEAAASALLAAVGNDLREIAAACSQLLADTDGKITEAVVARYYKGRAEV
SGFTVADAAMVGDLPGALEALRWALHVGVDPVPIADAIADGVRTVARVASAGRGNPYQLA
TTLGMPAWKIQRAQERSRGWTPDGLIDAMRAAAECNAAVKGGAEDRGYALEQAVFAVAAA
RRNGGAS
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgctctcggcccgcgccatcgccgcggccgtcgaggccgcacgggctgccgaccccggg
gccgacgtccgggaatacgaggcgggctcgctcgctgcgggcgaggtcgccgagatgctg
agtccgtcactgttcggcggccggcgggttcttgtgatcagaagcggtcaagatgcacgg
aaggatctgattgcggcgctcctggcgtacgcgaaagatcctgatcctgaagtgactttg
atcgtggctcatgtgggcggggcgaaaggcaaggcgttcgctgacggcctgcgtgcggcc
ggtgccgaggtggtgccggcggcgaagctgaagggtgatcgcgagcggatcgccttcgtg
cgcgacgagttccggcgtaacggtgcgaaatgcgacgaagcggcggcgtccgcgctgctc
gccgcggtcggcaacgacctgcgggagatcgcggcggcctgttcccagctgctcgccgac
accgacggcaagatcaccgaggcggtggtggcgcgctactacaaggggcgcgccgaggtg
agcggtttcacggtggccgacgccgcgatggtcggtgatctgccgggcgcgctggaggct
ctgcgctgggcgctgcacgtcggcgtcgacccggtgccgatcgccgacgcgatcgccgac
ggcgtgcggacggtggctcgcgtcgcctcggccggccgcggcaacccttatcaattggcg
accacgctcggcatgccggcgtggaagatccagcgggcgcaggagcgcagccgcggctgg
acgccggatggactgatcgacgcgatgcgtgccgccgccgagtgcaacgcggcggtcaag
ggcggcgcggaagatcgtggatacgcgctcgagcaggcggtcttcgcggtggcggcggcc
cggcgaaacggtggtgctagttga
DBGET
integrated database retrieval system
