Actinoplanes sp. OR16: ACTI_43980
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Entry
ACTI_43980 CDS
T10317
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
acte Actinoplanes sp. OR16
Pathway
acte00040
Pentose and glucuronate interconversions
acte01100
Metabolic pathways
acte01120
Microbial metabolism in diverse environments
acte02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acte00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
ACTI_43980
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACTI_43980
Enzymes [BR:
acte01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
ACTI_43980
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
F5_F8_type_C_2
Motif
Other DBs
NCBI-ProteinID:
BBH67713
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Position
complement(4782862..4784424)
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AA seq
520 aa
AA seq
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MRRALAISTGAGLVAAAALALPLAQANAAAVGSATGFAAANGGTTGGGSGTTVRASTGTA
IHTALCNRASASTPITIEVEGTITVGNTAKVSGDSCNTAAGVIELKEISNVTLIGVGGGA
TFDQIGIHIRDSSNIIIQNVTVKNVKKSGSPTSNGGDAIGMESTVRNVWVDHVTLEASGG
ESEGFDGLFDMKNDVEYVTLSYSILRNSGRGGLIGSSETDTGSGNITFHHNKYENIDSRT
PLLRGGVAHIYNNHYFSLNESGINSRAGAKARVDSNYFEDSKDVLGTFYTDQAGYWQVSG
NIFDNVTWSAPGEDNNPAGPNVTSNTSVSVPYSFTLDNASCVPSIVALTAGANKGIKTST
GTCSTTSQPSTPPSSSSPTPSNPTSPSPSTTTTTPPPSGTNLSLASGAGADGSSKASGTS
YGNVRDGNIATYWSPSSTTGDISIKWGSATTVSRINVRLASGSGTVSSYQVLNGTTGAVL
TSGSGSGVISFPATSLTKITYRINSASGTPRVGEFETYAN
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagacgagcacttgcgatcagtaccggggccggcctggtggccgccgccgctctggcc
ctccccctggcccaggcgaacgcggcagccgtcggcagcgccaccgggttcgcggcggcg
aacggcggcaccaccggcggcggcagtggcacgaccgtgcgggccagcaccggcaccgcg
atccacaccgcactctgcaaccgggccagcgccagcaccccgatcaccatcgaggtcgag
ggcacgatcaccgtcggcaacaccgcgaaggtctccggcgacagctgcaacacggcggcg
ggcgtgatcgagctcaaggagatcagcaacgtcacgctcatcggcgtgggcggcggcgcc
acgttcgaccagatcggcatccacatccgggattccagcaacatcatcatccagaacgtg
acggtgaagaacgtcaagaagtccggatcgccgacctccaacggcggcgacgccatcggc
atggagagcacggtccgcaacgtctgggtcgaccacgtgacgctcgaggcgtcgggtggc
gagtcggagggcttcgacggcctgttcgacatgaagaacgacgtggagtacgtgacgctg
tcgtacagcatcctgcgcaactccggccgtggcggcctgatcggctccagcgagaccgac
accgggagcggcaacatcacgttccaccacaacaagtacgagaacatcgactcccgcacc
ccgctgctgcgaggcggcgtcgcgcacatctacaacaaccactacttctcgctgaacgag
tccgggatcaactcgcgggccggcgcgaaggccagggtggacagcaactacttcgaggac
tcgaaggacgtgctcggcacgttctacaccgaccaggccggatactggcaggtcagcggc
aacatcttcgacaacgtgacctggtcggcgccgggtgaggacaacaacccggccgggccg
aacgtcacctcgaacaccagcgtgagcgtgccgtactcgttcaccctcgacaacgcctcc
tgcgtcccgtcgatcgtggcgctgacggccggcgcgaacaagggcatcaagacgtcgacc
ggcacctgctccacgacctcgcagccgtcgacgccgccgtcgagcagcagcccgacgccg
agcaacccgaccagcccgagccccagcacgaccacgacgaccccgcccccgtccggcacc
aacctgagcctcgcctccggcgccggcgccgacggttccagcaaggccagcggcaccagc
tacggcaacgtccgcgacggcaacatcgcgacgtactggtccccgagcagcaccaccggc
gacatctcgatcaaatggggttcggccacgacggtctcccgcatcaacgtccgcctcgcc
agcggcagcggcacggtcagctcctaccaggtcctcaacggcaccaccggcgcggtcctg
accagcggcagcggctccggtgtcatctccttcccggccacttcgctcaccaagatcaca
tacaggatcaacagcgcttccggtacgccgagagtcggcgagttcgagacttacgccaac
tga
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