Actinomyces sp. HMT897: JJJ15_07790
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Entry
JJJ15_07790 CDS
T10470
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acth Actinomyces sp. HMT897
Brite
KEGG Orthology (KO) [BR:
acth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acth03032
]
JJJ15_07790 (topA)
03400 DNA repair and recombination proteins [BR:
acth03400
]
JJJ15_07790 (topA)
Enzymes [BR:
acth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JJJ15_07790 (topA)
DNA replication proteins [BR:
acth03032
]
Prokaryotic type
DNA Topoisomerases
JJJ15_07790 (topA)
DNA repair and recombination proteins [BR:
acth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JJJ15_07790 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QQO76995
UniProt:
A0A974N8J8
LinkDB
All DBs
Position
1985056..1988130
Genome browser
AA seq
1024 aa
AA seq
DB search
MSHKLVIVESPNKVRSIAGYLGDDYEVAASVGHIRDLAQPSELPADMKKGPYGRFAVDVE
DGFVPYYVVNPDKRKTVAALRKALKGADELYLATDDDREGEAIAWHLLQVLKPKVPVKRM
TFTEITREAVTRALANTRDLDTHRVDAQETRRILDRLVGYEVSPVLWRKIRAGLSAGRVQ
SVATRLVVERERERMAFTSAGYWGVEARLSAHQGAGTTGAAPGADVGPGTASGAAPAPGA
VPGAPETEDSAFTARLSALDGHRVATGRDFDDTGQLRPAARRAGTVHLHQDAAVAVAEAV
RRSTPRVAEVEDKPYKRRPAAPFTTSTLQQEASRKLRMNPRETMRVAQGLYENGFITYMR
TDSTVLSSQAVAAARAQVAELYGAEYVPARPRVYATRAKGAQEAHEAIRPAGDHFRTPAQ
VANELSGAQFRLYELIWKRTVASQMADAVGSTATVRVEVPLAGAKGTRSDGGLTFTTASF
TASGTVITFRGFLAAYEEGRDAERYESESGGRTGTKGGRDVRLPAMSVGQELTALGSQAA
GHETTPPPRYTEASLVKALEEREIGRPSTYAATMSTISDRGYVDHRGQALVPTWLAFAVT
RLLEENFAELVDYDFTASMEADLDRIAAGQEDRVGWLTRFYYGEGAGDAAAGASPAGAAG
AGGNAAAGADAAPAGSGKGPGTGPVHGAEQGLRSMVDNLGEIDARAVNSIEIGEGMTLRV
GRYGPYLEDAEGRRANVPADVAPDELTVDRARELLARAADDGRELGVDPATGHMIIAKDG
RYGPYVTEVLPEEEAPEASGAAPETAEGAGGAETAGATSGGRTTRARTTRARTKKPKPRT
ASLLKSMDLGTVTLEQALDLLSLPRVVGQDAEGVDITAQNGRYGPYLKKGTDSRSLESEE
EIFTVTLEQALELFAQPKRRRGQAAPRGPLRELGEDPATGRPVVIKDGRFGPYFTDGETN
VTLRRGDDPATVTPERAYELLAEKRAKGPVKKRTTRRTSAKKTTKKTASSGTSTKKASTK
KASS
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccacaagcttgtcatcgtcgagtcccccaacaaggtccgctcgatcgccggctac
ctgggggacgactacgaggtcgccgcctccgtggggcacatccgcgacctcgcccagccc
tccgagctgcctgcggacatgaagaagggtccctacggcaggttcgccgtggacgtggag
gacgggttcgtcccctactacgtggtcaaccccgacaagcgcaagaccgtcgccgccctg
cgtaaggctctcaagggtgccgacgagctctacctggccaccgacgacgaccgtgaggga
gaggccattgcctggcaccttctccaggtcctcaagcccaaggtccccgtcaagcgcatg
accttcacggagatcacccgcgaggccgtcacccgggccctagccaacacccgcgacctg
gacacccaccgcgtggacgcccaggagacccgccgcatcctggaccggctcgtgggctac
gaggtctccccggtcctgtggcgcaagatccgtgccgggctgtccgccgggcgcgtccag
tccgtggccacccgcctggtggtcgagcgcgagcgcgagcgcatggccttcacctccgcg
ggctactggggcgtggaggcccgcctgtccgcccaccagggtgccgggaccacgggcgcc
gcgcccggggccgacgtcggacccgggactgcgtctggggccgcgcccgcgcccggggct
gtgccgggcgcccccgagacggaggactccgccttcaccgcccgcctgagcgccctggac
ggtcaccgggtggccaccggacgcgactttgacgacaccggccagctgcgtcccgcggcc
cgcagggccgggacggtccacctgcaccaggacgccgccgtcgccgtcgccgaggccgtg
cgccgctccaccccccgcgtggccgaggtggaggacaagccctacaagcgtcgtccggcc
gcccccttcaccacctccaccctccagcaggaggcgtcccgcaagctgcgtatgaacccg
cgcgagaccatgcgtgtggcgcagggcctgtacgagaacggctttatcacctacatgcgc
accgactccacggtcctgtcctcccaggcggtggcggcggcccgcgcccaggtggccgag
ctctacggggccgagtacgtgcccgcccgcccccgcgtctacgccacccgggccaagggc
gcccaggaggcgcacgaggccatccgccctgccggggaccacttccgcacccccgcccag
gtcgccaacgagctcagcggcgcccagttccgcctctacgagctcatctggaagcgcacc
gtggcctcccagatggccgacgccgtcggctccaccgccaccgtgcgtgtggaggtgccc
ctggccggtgccaagggcaccaggagcgacggcggactgaccttcaccaccgcctccttc
acggcgtcgggcacggtcattaccttccgtggcttcctggccgcctacgaggaggggcgc
gacgccgagcgctacgagtcggagtcgggcggcaggaccggcaccaagggcggcagggac
gtgcgcctgccggcaatgagcgtgggccaggagctgaccgccctgggcagccaggcggcc
ggtcacgagaccactccgccgccgcgctacaccgaggcctccctggtcaaggccctggag
gagcgggagatcggtcggccctcgacctacgcggccaccatgtccaccatctccgaccgc
ggttacgtggaccaccgcggccaggccctggtacccacctggctggccttcgcggtgacc
cgcctgctggaggagaacttcgccgagctggtcgactacgacttcaccgcctccatggag
gccgacctggaccgtattgccgctggccaggaggaccgggtggggtggctcacccgtttc
tactacggggagggcgccggcgacgccgctgcgggcgccagcccggccggggctgcgggc
gccgggggtaatgccgctgcgggcgctgacgccgccccggccgggtccgggaagggcccc
ggcacgggtcctgtccacggtgcggagcaggggctgaggtccatggtggacaacctcggt
gagatcgatgcgcgggctgtgaactccattgagatcggtgagggcatgaccctgcgcgtg
ggccgctacggtccctacctggaggacgccgagggcaggcgcgccaacgtgcccgccgac
gtcgcccccgacgagctgaccgtggacagggcgcgtgagctccttgcccgcgctgctgac
gacgggcgcgagctcggtgtggacccggccaccgggcacatgattatcgccaaggacggg
cgctacggcccctacgtcaccgaggtcctgcccgaggaggaggccccggaggcctccggg
gcggcgcccgagacggccgagggcgctggcggggctgagaccgccggggcgacgtcgggc
ggcaggacgaccagggcgaggacgacgcgggccaggaccaagaagcccaagccgcgcacg
gcgagcctgctgaagtccatggacctgggtaccgtcaccctggagcaggccctggacctg
ctcagcctgccgcgggtggtgggccaggacgccgagggcgtggacattaccgcccagaac
ggccgttacggcccctacctcaagaagggcacggactcacgttccctggagagcgaggag
gagatcttcacggtcaccctggagcaggccctggagctcttcgcccagcccaagcgtcgc
cggggccaggcggcgccgcgcggaccgctgcgtgagctgggggaggacccggctaccggc
aggcccgtggtcattaaggacgggcggttcggcccctacttcactgacggggagacgaac
gtgaccttgcgccggggcgacgaccccgccaccgtcacccctgagcgggcctacgagctg
ctcgcggagaagcgcgccaaggggcctgtcaagaagcgcacgacccgtaggacgtcggct
aagaagactactaagaagactgcttcgtcggggacgtccaccaagaaggcgtccactaag
aaggcctcctcatag
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