KEGG   Actinomyces sp. HMT897: JJJ15_11040
Entry
JJJ15_11040       CDS       T10470                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
acth  Actinomyces sp. HMT897
Brite
KEGG Orthology (KO) [BR:acth00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acth03032]
    JJJ15_11040
   03036 Chromosome and associated proteins [BR:acth03036]
    JJJ15_11040
   03400 DNA repair and recombination proteins [BR:acth03400]
    JJJ15_11040
DNA replication proteins [BR:acth03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    JJJ15_11040
Chromosome and associated proteins [BR:acth03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    JJJ15_11040
DNA repair and recombination proteins [BR:acth03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      JJJ15_11040
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF7342 HU-DNA_bdg DSBA DUF2267
Other DBs
NCBI-ProteinID: QQO77540
UniProt: A0A974N9H5
LinkDB
Position
2853372..2853653
AA seq 93 aa
MSVNRTELIAAIAEKAGLTKTDADTFLGAFQDVLVENVAKGEAVKITGLMGVERVERAAR
TGRNPRTGEEIQIPAGYGVKLTAGSALKKAVQA
NT seq 282 nt   +upstreamnt  +downstreamnt
atgtccgtcaaccgcactgagctcattgccgccatcgctgagaaggctggtctgaccaag
accgacgccgacaccttcctcggcgccttccaggacgtcctggtggagaacgtcgccaag
ggtgaggccgtcaagatcaccggtctcatgggggtcgagcgcgtcgagcgcgccgcccgc
accggtcgcaacccgcgcacgggcgaggagatccagatcccggccggctacggcgtcaag
ctcactgccggctccgccctcaagaaggccgtccaggcctga

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