Actinoalloteichus sp. GBA129-24: UA75_02955
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Entry
UA75_02955 CDS
T04619
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit, predominant form
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
acti
Actinoalloteichus sp. GBA129-24
Pathway
acti03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acti00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UA75_02955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acti03021
]
UA75_02955
03400 DNA repair and recombination proteins [BR:
acti03400
]
UA75_02955
Enzymes [BR:
acti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UA75_02955
Transcription machinery [BR:
acti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UA75_02955
DNA repair and recombination proteins [BR:
acti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UA75_02955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
APU18626
LinkDB
All DBs
Position
644949..648860
Genome browser
AA seq
1303 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPMRDWEC
YCGKYKRVRFKGIVCERCGVEVTRSRVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVNTDLRHNDLPTLENEFGVERKRVEEKRDADIEARAQKLEAD
LAELEAEGAKSDVRRKVKEGGEREMRQLRDRTQRELDRLDEIWTTFTKLEPKQLVPDELI
YRELYDRYGDYFTGGMGAEAIQSLLGTFDIGREAEILRDTIRNGKGQKKLRALKRLKVVA
AFLATGNSPQGMVLDCTPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
GQVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGIYFLTKVREGAPGEGH
AYSSPSEAIMAYDRGALSLHAKAKIRVTDRVPPRGQEPEDWEPGKAWLAETTLGRVLFND
LLPADYPFIDELLPKKKQAAIVNDLAERYPMVVVAQTLDKLKDAGFHWATRSGITIAISD
VVVPADKQDILDKYELEASRIEKRYQRGALSYTERNSELVKVWQRAKDEVAEAMEKNFPE
DNPIPTIVKSGAAGNMTQVVQLAGMRGVVSNTKGEYIPRPIKANFREGLSVLEYFISTHG
TRKGLADTAIRTADSGYLTRRLVDVSQDVIIRETDCGTERGIIMPIGESGPDGKLVWDVH
VETSVYSRSSAEDVTDEDGNVLLARGSDLGDSAIETLLTAGVSKLKVRSVLTCESAVGVC
AVCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVAGDDITTGLPRVQEL
FEARIPKGKAPISEVDGRIQMEEGERFRKITIIPDDGSEEIVHDKLSRRQWLATIKVDDS
ERPIQDGDRVTVGQQLLEGAVDPHEVLRVMGPREAQLHLVREVQKVYRTQSVSIHDKHIE
VIVRQMLRRVTVIDSGSTEFLPASWAERSVFEAANRRVVAQGGEPASGRPVLMGITKASL
ATESWLSAASFQETTRVLTDAAINGKSDKLVGLKENVIIGKLIPAGTGINRYRHIQVQPT
EEARAAAYAIPSYDDGYYTPDVFGTGTGAAVPLDDYDFGRDFR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacttcttcgatgaactccgtatcggcctggccacggcagacgacatt
cgtcagtggtcctacggcgaggtcaagaagcccgagaccatcaactaccgcacgctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggtcccatgcgggactgggagtgc
tactgcggcaagtacaagcgcgtccgattcaagggcatcgtctgtgagcgatgcggcgtc
gaggtgacccgttccagggtccgtcgtgagcgcatggggcacatcgagctggccgccccc
gtcacgcacatctggtacttcaagggcgtgccgagccggttgggctacctgctcgacctg
gcgcccaaggatctcgagaagatcatctacttcgcggcgtacgtgatcacctcggtgaac
accgacctgcgtcacaacgaccttcccacgctggagaacgagttcggcgtggagcgcaag
cgggtcgaggagaagcgcgacgccgacatcgaggctcgggcgcagaagctcgaggctgac
ctcgccgagctggaggcggagggcgccaagagcgacgtccgccgcaaggtcaaggagggc
ggcgagcgggagatgcgccaactccgcgaccgcactcagcgagagctggaccggctcgac
gagatctggacgaccttcaccaagctggagcccaagcagctcgtgcccgacgagctgatc
taccgcgagctctacgaccggtacggcgactacttcaccggcggcatgggcgcggaggcg
atccagtcgctgctgggcaccttcgacatcggccgcgaggcggagatccttcgggacacg
atccgcaacggcaagggccagaagaagctcagggcgctgaagcggctcaaggtcgtggcg
gccttcttggccaccggcaacagcccgcagggcatggtcctcgactgcaccccggtgatc
ccgccggacctgcgtccgatggttcagctcgacggcggccggttcgccacgtccgacctg
aacgacctgtaccgacgggtgatcaaccggaacaaccgtctcaagcgactgatcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcggatgctccaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggtcgccccgtcaccggccctggcaaccggccgttgaag
tcgctgtccgacctgctcaagggcaagcagggtcgattccgccagaacctcctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctgaagctgcaccag
tgtggtctgcccaagcagatggctctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctgaaccacgctcagaacatcaagtcggccaagcggatggtcgagcggcagcgc
ggccaggtgtgggacgtcctcgaagaggtcatcaccgagcacccggtgctgctgaaccgt
gcgccgacgctgcaccggctgggcatccaggccttcgagccgcagctcgtcgagggcaag
gcgatccagcttcacccgctggtctgtgaagcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtcggcggaggcgcaggccgaggctcgcatcctgatgctg
tcgagcaacaacatcctgtcgcccgcgtcgggtcgtccgctggccatgccgcgactggac
atggtcaccggcatctacttcctcaccaaggtccgtgagggagcaccgggcgaaggccac
gcgtactcctcgccgtccgaggcgatcatggcctacgaccggggtgccctctcgctgcac
gccaaggcgaagatccgcgtcaccgaccgggtcccgccgcgtgggcaggagccggaggac
tgggagccgggcaaggcgtggctggccgagaccacgctcgggcgggtgctgttcaacgac
ctgctgcccgccgactacccgttcatcgacgagctgcttccgaagaagaagcaggccgcg
atcgtgaacgacctcgcggagcgctacccgatggtcgtcgtggcgcagacgctggacaag
ctcaaggacgcgggcttccactgggccacccgctccggcatcacgatcgccatctcggac
gtggtggttcctgcggacaagcaggacatcctcgacaagtacgagctggaggccagccgt
atcgagaagcgctaccagcgtggcgcgctctcctacacggaacgcaacagcgagctggtc
aaggtctggcagcgggcgaaggacgaagtcgccgaggcgatggagaagaacttccccgag
gacaacccgatccccacgatcgtgaagtccggtgctgcgggcaacatgacgcaggtcgtg
cagctggccggtatgcgtggcgtggtgtccaacaccaagggcgagtacatccctcggccg
atcaaggcgaacttccgtgagggcctgtcggtgctggagtacttcatctccacgcacggc
acccgaaagggactcgccgacaccgcgattcgtaccgccgactcgggttacctgacccgg
cgtctggtggacgtctcgcaggacgtcatcatccgcgagacggactgcggcaccgagcgc
ggcatcatcatgccgatcggcgagagtggccccgacggcaagctcgtctgggacgtccac
gtcgagaccagcgtctactcgcgtagctctgcggaggacgtcaccgacgaggacggcaac
gtgcttctcgcacgtggttcggacctcggcgactcggcgatcgagaccctgctcaccgct
ggcgtgtcgaagctgaaggtgcggagcgtgctgacctgcgagtcggccgtcggggtgtgc
gcggtctgctacggccgttcgatggcgaccggcaagctggtcgacatcggcgaggcagtg
ggcatcgtcgccgcacagtcgatcggtgagcccggcacgcagctcacgatgcgtacgttc
caccagggtggcgtcgccggtgacgacatcaccaccggtctgcctcgtgtgcaggagctc
ttcgaggcccgcatccccaagggcaaggcgccgatctccgaggtcgacggccgaatccag
atggaggagggcgagcgcttccggaagatcacgatcattccggacgacggcagcgaggag
atcgttcacgacaagctgtcccggcggcagtggctggccaccatcaaggtggacgacagc
gagcggccgattcaggacggcgaccgcgtgacggtcggccagcagctgctggaaggtgcg
gtcgacccccacgaggtgctccgggtcatgggccccagggaggctcagcttcacctggtg
cgcgaggtgcagaaggtgtaccggacgcagagcgtgtcgatccacgacaagcacatcgag
gtcatcgtccggcagatgctccgacgggtcacggtcatcgactcgggctccacggagttc
ctgcccgcctcctgggccgagcgcagcgtgttcgaggctgccaaccgtcgagtggtggcg
cagggcggcgagcctgcctcgggtcgcccggtcctgatgggcatcacgaaggcgtcgctg
gccaccgagtcgtggctgtcggcggcctccttccaggagacgaccagggtgctcaccgat
gccgcgatcaacggcaagagtgacaagctggtcggcctgaaggagaacgtgatcatcggt
aagttgatcccggcaggcacgggcatcaaccgctaccggcacatccaggtgcagccgacc
gaggaggcgcgggccgcagcgtatgcgatcccgtcctacgacgacggctactacaccccg
gacgtgttcggcaccggcaccggtgcggcagtgccgctggacgactacgacttcggccgc
gacttccgctga
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