Actinoalloteichus sp. GBA129-24: UA75_04890
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Entry
UA75_04890 CDS
T04619
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acti
Actinoalloteichus sp. GBA129-24
Pathway
acti03420
Nucleotide excision repair
acti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UA75_04890
03430 Mismatch repair
UA75_04890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acti03400
]
UA75_04890
Enzymes [BR:
acti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UA75_04890
DNA repair and recombination proteins [BR:
acti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UA75_04890
MMR (mismatch excision repair)
Other MMR factors
UA75_04890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Replic_Relax
AAA_12
Motif
Other DBs
NCBI-ProteinID:
APU19007
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All DBs
Position
1047336..1050752
Genome browser
AA seq
1138 aa
AA seq
DB search
MIGSRAIGDRGTVTPAELAEALGLPVPTEEQARVIAAPGEPALVIAGAGAGKTETMAARV
VWLVANGLVAPERVLGLTFTRKAARQLADRVRARLRRLVGSGLLDRLDPGGGRTSAVLAG
EPTVLTYHAYAGRLVAEHGLRLPAEPGARLLSETAAWQLAHRVVSTWTEDIDTDKVPATV
TGYLLGLAGELAEHLVTPEQLRAHAADFCRVVEEAPRVARQRMALPQELRDKLAVQRLRV
ALLPLLDDYTARKRREGVLDFADQMSAAARLADEHPEVAAGEQARFGAVLLDEYQDTGHA
QRVLLRALFGDGDRLPVTAVGDPAQAIYGWRGASAANLPRFRTDFPRVDAHGEPAPARGY
GLLTSFRNPPEVLTLANAVSAPLRAAGLEVEELRPKPGAEQGDVHCALLSDVRLERAWLA
SAVATRWRAVVAETGSPPTAAVLVRRRADMAELAEALRAEGLPVEVVGLGGLLDEPEVRD
LVSALRMLVDPLAGTAAARLLTGARWRLGIADLAALWARAGRLADSGDRRESSGSPVDAL
PGEHAEQAGLIDALEDPGPATDYSPAGFRRIQRLARELAMLRRRLDQPLPELVADVERTL
LLTVESLARPGSVGRAHLDAFADVVADFAAASPVAGLPALLDYLRVAERAEDGLEPGEVE
VAEDRVQVLTMHAAKGLEWEVVAVPHVVEKVFPGGRRSADWLGSVVQLPAELRGDAVDLP
ELRIPAGADRKVVIESLAQHSEDFEQRRLLEERRLCYVALTRSERTLLVSGHWWGETGKS
PRGPSDFLKQVKEVLTARPEVGTVDRWAAPPEPDEENPLASTVNSAEWPKDPLGSRRADV
LAGAALVRGELRALLDEHRLDRADEDRPADVGVAGGPAVAAGPMVDSGAGTVADHAGADS
AAEPVLDEDDPEGWQRDVSVLLAERASAANAADQVLLPAQFSVSRLVELAADPEGLARRL
RRPLPYPPSQAARRGTAFHAWLERRFSVTRLLDVDDLPGAADDDEDEPIAALADLQEAFL
AGSWADRTPHAVEVSFETEIEGVALRGRMDAVFADADGGWTVVDWKTGAPPPSDRLPALA
VQLAAYRLAWAALSRTPLIQVRAAFHYVRADRTVQPADLLDAEGIRALLRKIPDAGDP
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
gtgatcggcagccgagcgatcggtgaccggggcacggtcacccctgccgaactcgccgag
gcgctcggtcttccggtgcccactgaggaacaggccagggtgatcgccgcgcccggcgaa
cccgccctggtgatcgcgggtgcgggtgcgggcaagaccgagacgatggcggccagggtc
gtctggctggtggccaacggcctggtcgccccggagcgggtcctcggcctgaccttcacc
aggaaggcagcgcgtcagctcgccgaccgcgtccgggcccggctgcggcggctggtgggc
tccgggctgctcgaccggctcgatccgggcggcggccgcacctcggcggtgctcgcgggc
gagccgaccgtcctgacctatcacgcgtatgcgggcaggctggtcgccgagcacgggctc
cggctgcccgccgagcccggcgcgcgactgctcagcgagaccgccgcctggcagctcgcg
caccgcgtggtgtccacctggacggaggacatcgacacggacaaggtcccggccaccgtc
accggctacctgctcggactggcgggcgaactcgccgagcatctggtcacccccgaacag
ctgcgcgcccacgcggcggacttctgccgtgtcgtggaggaggctcctcgggtcgccagg
cagcggatggcgttgccgcaggaactccgcgacaagctggccgtccagcgcctccgggtg
gcgctgctgccgctgctggacgactacacggcgcggaaacgccgcgagggggtgctcgac
ttcgccgatcagatgtcggccgccgcgcgactggccgacgagcatccggaggtcgcggcg
ggcgagcaggcccggttcggcgcggtgctgttggacgagtatcaggacaccggacacgcg
cagcgcgtcctgctgcgggccctcttcggggacggcgaccgactgccggtgacggcggtg
ggcgacccggcacaggcgatctacggctggcgcggcgccagcgcggcgaacctgcctcga
ttccgcaccgacttcccccgcgtcgacgcgcacggcgaaccggcccctgctcgcggttac
gggctgctgaccagcttccgcaatccgccggaggtgctgacgctggccaatgcggtgtcc
gccccgttgcgggccgccggactggaggtcgaagagctgcggccgaagccgggtgcggag
cagggcgacgtgcactgcgccctactgtccgacgtccgactcgaacgcgcctggctggcc
tcggccgtggcgacccggtggcgggccgtggtggcggagaccggcagtccaccgaccgct
gccgtgctggtgcggcgccgggcggacatggccgagctggcggaggcgctccgggccgag
ggactcccggtcgaggtcgtggggctcggcggcctgctggacgagccggaagtgcgtgat
ctggtcagcgccctgcggatgctggtcgatccgttggcggggacggcggcggctcggctg
ctcaccggggcgcgctggcggttgggcatcgcagacctggccgcgttgtgggccagggcg
ggtcggctcgccgacagcggtgatcggagggagtcgagcggatcaccggtggacgcactg
cccggtgaacatgccgagcaggccgggctgatcgacgcgttggaggaccccggccccgcc
accgactattcgcctgcgggcttccgccggatccaacggctggccagggaactggcgatg
ctgcgacggcgactcgatcagccgctgcccgagctggtcgccgacgtcgagcggaccctg
ctcctcacggtggagagcctcgcccgtcccggcagcgtcggccgtgctcatctcgacgcc
ttcgccgacgtcgtcgcggacttcgcagccgccagcccggtcgcgggcctgcccgccctg
ctggactacctgcgggtggcggagcgggccgaggacggcctggagcctggcgaggtggag
gtcgccgaggaccgggtgcaggtgttgaccatgcacgccgccaagggcctggaatgggag
gtcgtcgccgtcccgcacgtggtggagaaggtgttccccggcgggcggcgctcggcggac
tggctcggctcggtggtccagctccccgccgagctgcggggcgatgccgtcgacctgccc
gagctgcggatacctgcgggcgccgaccgcaaggtcgtcatcgagtcgctcgcgcagcac
tcggaggacttcgagcagcggcggctgctggaggagcgcaggctctgttacgtggcgctg
accaggtcggagcgaacgctgctcgtgtccggacactggtggggcgagacggggaagagc
ccacgcgggccgtccgacttcctgaagcaggtcaaagaggtgctcaccgcccggcccgag
gtcgggacggtcgatcgctgggcggcgcccccggaacccgacgaggagaacccgctggcg
tcgacggtcaattcggcggaatggccgaaggacccgttgggctcgcggcgcgccgacgtg
ctcgcgggcgccgcgctggtgcggggcgagctgcgggctctgctggacgagcaccggctc
gaccgggcggacgaggaccggcctgccgatgtcggagtcgcaggcgggcctgcggtcgcg
gccgggcccatggtcgactccggggcgggaaccgtggccgaccacgcgggcgccgactcg
gctgcggagccggtgctcgatgaggacgatcccgagggatggcagcgagacgtctcggtg
ctgctcgccgaacgggcctcggcggcgaacgcggccgatcaggttctgcttcccgcacag
ttctcggtgagcaggctcgtggaactggccgccgacccggagggcctggcgcgcagactg
cgcaggccgctgccgtatccgcccagccaggcggctcgacgcggcaccgcgttccatgcc
tggctggagcggcgcttctcggtcacccggttgctcgacgtcgacgaccttcccggcgcg
gcggacgacgacgaggacgagccgatcgcggcgttggccgatctccaggaggcgttcctg
gcgggttcctgggcggaccggacgccccacgcggtggaggtctccttcgagaccgagatc
gagggggtggcgctgcggggccggatggacgccgtgttcgccgatgccgacggcggctgg
accgtggtcgactggaagaccggggcaccgcctccttcggaccggctgcccgcgctcgcc
gtgcagctcgcggcctaccggctggcatgggcggcgctctcccgcacgccgctgatccag
gtgcgcgcggccttccactacgtgcgcgccgaccggaccgtgcagcccgccgacctgctc
gatgccgagggcatccgggcactgctacgaaagatccccgatgcgggtgacccctga
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