Actinoalloteichus sp. GBA129-24: UA75_05100
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Entry
UA75_05100 CDS
T04619
Name
(GenBank) helicase family protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
acti
Actinoalloteichus sp. GBA129-24
Brite
KEGG Orthology (KO) [BR:
acti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acti03019
]
UA75_05100
Enzymes [BR:
acti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UA75_05100
Messenger RNA biogenesis [BR:
acti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
UA75_05100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_19
AAA_30
AAA_22
AAA
nSTAND3
AAA_11
HA2_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
APU19047
UniProt:
A0A1L7F2J7
LinkDB
All DBs
Position
complement(1099298..1101880)
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AA seq
860 aa
AA seq
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MLPAELPALPIRDVLDTVTAALADRGVAVLSAPPGTGKTTLVPLALASAGLRVLVAEPRR
LATRAAAARMAELCGDAVGETVGYAVRGDRRRSAATRVEVVTSGLLVRRLQSDPELPGVD
VVLLDECHERHLDADLALALLLDARAGLRPDLRLLAASATVDTDRLARLLDDAPVIHATT
RTFPVQTSYVAPVRRERVENTVARAVRTALAENTGDLLVFLPGAGEIRRVTALLGGLGDV
DVLPLHGRLSTERQDHALRTGPRRRVVLATAVAESSLTVPGVRVVVDSGLARTSRTDHRR
GLSGLVTGRVSAAVADQRAGRAGRQGPGRVYRCWPEHEHSTLPRHPEPEIRTADLTRLAL
ELACWGTPDGAALRWWDAPPSGPLAAGRDVLTAIGALDASGTVTARGTRFAGLGLHPRLA
RALWDGAARLGTDTAAEIVALLDEEPGGTSDLLDAWRLSRTAEGGSARLRRETSRLARLV
ADAVPPGLRSRGRATGPGTAAGRPTAGRPESDVSSPADRNPGGADRTRSGAGSSSGAAQA
EAAALVVGLAFPERLARRRGAAGSTYLMAGGTAVDLPSGSALTGAAWLAVAVADRSPGQP
HATVRLAARADVDLATAAAPALLAEADEVGWVDGEVRARRVRRLGAIVLTERDLTDPDPT
AVRAAVLTGLRKEGLGLLRWEPAATALRDRLAFLHHALGEPWPAMSDEALSSTLDDWLGP
ALTRVRRRADLARVDAGQALRRIIPWEVAGRLDELAPERIEVPSGSKVRIDYRSERPVLP
VKVQEAFGWSQTPRVAGGRVPVLLHLLSPAGRPAAVTDDLASFWSTGYPQVRSELRGRYP
RHPWPEDPTTATPTRRLRPR
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
gtgctccccgccgagctgcccgcgctgcccattcgggacgtgctcgacacggtgaccgcc
gcgctcgccgatcgaggcgtcgcggtgctcagcgcgccgccaggcaccgggaagaccacg
ctggtgccgctcgcgctcgcctcggccgggctccgggtcctcgtcgccgaaccgaggcgg
ctggccacacgggcggccgccgcgcggatggccgagctgtgcggggacgccgtcggcgag
acggtgggctacgccgtgcgcggtgatcgacgtcgctccgccgcgacccgcgtcgaggtc
gtgaccagcggtctactggtgcgcaggctccagtccgatccggagctgcccggtgtcgac
gtcgtgctgctcgacgaatgccacgagcggcatctggacgccgatctggccctggcgctg
ctgctggacgcccgcgccgggctgcgcccggatctgcgactgctcgccgcctccgccacc
gtcgacaccgaccggctggcccgcctgctcgacgacgccccggtgatccacgcgaccacc
cgaaccttccccgtgcagacctcctatgtcgcgccggtccgccgcgaacgggtcgagaac
accgtggcgagggcggtgcgcaccgcgctggccgagaacaccggtgacctgctggtcttc
ctccccggcgcgggcgagatccgccgagtgaccgcgctcctcggcggcctcggcgacgtc
gacgtactaccgctgcacggcaggctgagcaccgagcgccaggaccatgccctgcggacg
ggtcctcgacgccgggtggtgctggccaccgccgtggccgagtcgagtctcacggtgccg
ggcgtccgggtggtggtcgactccgggctggccaggacgtcgcgaaccgatcatcggcgc
ggcctgtccggcctggtcaccggccgggtctcggcggccgtcgccgatcagcgtgcgggc
cgcgcgggcaggcagggccccggccgggtgtatcgctgctggccggagcatgagcactcg
accctgccgcgccacccggagcccgagatccgcacggccgacctcaccaggctggccctg
gaactcgcctgctggggcaccccggacggcgccgccctgcggtggtgggacgctccgccg
tcgggcccgctggcggcgggccgcgacgtgttgaccgcgatcggcgccctcgacgcgagc
gggacggtgaccgctcgcggcacccgattcgccgggctcggtctgcatcctcggctggcg
cgggcgctctgggacggtgcggctcggctcggcaccgacaccgcagccgagatcgtcgcg
ctgctcgacgaggagcccgggggcacctcggatctgctcgacgcctggcggctctcccgc
acggcggagggcggctcggcccggctgcgacgcgagacgagcaggctggctcggctcgtc
gccgacgccgtgccgcctggcctgcgttcgcggggcagggcgaccggaccgggtacggcc
gccggacgaccgacggcgggcaggccggagtcggacgtctcgtcccccgccgaccggaat
cccggcggggcggaccgcacccggtcgggcgcaggctcgtcgtccggcgccgcgcaggcg
gaggccgccgcgctcgtggtggggctggccttccccgaacggctggcgcgacgacgcggc
gcggcgggctccacctatctgatggcaggcggcactgcggtcgacctgccctcgggcagt
gcgctgaccggtgccgcctggctcgccgtcgcggtcgccgaccgatcgccgggacaaccg
cacgccaccgtccggctcgccgcccgcgccgacgtcgacctggccacggccgccgcaccc
gcgctgctggccgaggccgacgaggtcggctgggtggacggcgaggtgcgggcccggcgg
gtgcggcggctgggcgcgatcgtgctgacggagcgggatctcaccgaccccgacccgacg
gcggtgcgggcggcggtgctcaccgggctgcggaaggaggggctgggcctgctgcgctgg
gagcccgccgcgacggcgctgcgtgatcggctggcgttcctgcatcacgccctgggcgag
ccgtggcccgcgatgagcgacgaggcgctgtcgtcgaccctggacgactggctcggcccc
gcgttgacccgagtccgccgccgagccgatctggcccgcgtcgacgccgggcaggccctg
cgcaggatcatcccgtgggaggtcgcgggcaggctggacgagctggcgcccgagcgcatc
gaggtgccgtctggctccaaggtccgcatcgactaccgcagcgaacggccggtgctgccg
gtgaaggtgcaggaggccttcggctggtctcagacgcccagggtcgcgggcggccgggtg
ccggtgctgttgcacctgctgtcgcccgcaggcaggcccgccgccgtcaccgacgacctc
gcgtcgttctggagcaccggatatccacaggttcgatcggaactgcgcgggcgctatccc
cggcatccctggccggaggaccccaccacggccacgccgacccgcaggctgcgaccgcgc
tga
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