Actinoalloteichus sp. GBA129-24: UA75_08160
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Entry
UA75_08160 CDS
T04619
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
acti
Actinoalloteichus sp. GBA129-24
Pathway
acti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UA75_08160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acti03019
]
UA75_08160
03009 Ribosome biogenesis [BR:
acti03009
]
UA75_08160
Enzymes [BR:
acti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
UA75_08160
Messenger RNA biogenesis [BR:
acti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UA75_08160
Ribosome biogenesis [BR:
acti03009
]
Prokaryotic type
rRNA processing factors
UA75_08160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
APU19648
UniProt:
A0A1L7F4D9
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All DBs
Position
1809635..1812484
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AA seq
949 aa
AA seq
DB search
MKNAPADERSGVADARAGGTELPAKLRVHALAKLLEVRSKDVLTALEALGAEVRSAQSSV
SRDLALQVIEKLAPAEEAAGTPSAAAEESAAAAEQPAEDSGPRAAAAPVFAPPQPVFLPP
QPAAAPAARQAPAKQAAAKQPQAAEPVEQAVVSPSAPEDVDEDEDAGSRRRRRRGRRGRG
RGRGGQDAEGGEEPGDDEDGTPAETAADVVPEAPAEEQAAAEQDGEDTEGEQSEGSRRRR
RRRRRKGTAEDDAASRSDDPPNTVVHVRESKPAQVKAEPVVEDEVRSVRGSTRLEAKRQR
RRDGREAGRRRVPVLSEAEFLARRESVERRMVVRERGDRTQIAVLEDGVLVEHFVTSSGT
GSIVGNVYLGRVQNVLPSMEAAFVDIGRGRNAVLYAGEVDWDAAGLEGKARKIEQALSTG
DSVLVQVTKEPVGHKGARLTTQISLPGRFLVYVPGGGATGISRKLPDVERKRLKEILKRI
VPDEAGVIIRTASEGTSEESLDRDVRRLRAQWEIIKERAAIPRAQAPQLLYEEPDLLIKV
VRDLFTEDFSGLVVQGDTAWDTIESYVNHVAPDLVGRLRRHVGLKDAFTEHRVDEQLAKA
LDRKVWLPSGGYLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTRNNLESVEEIVRQLRLR
DIGGIIVIDFIDMVLESNRDLVLRRLTECLGRDRTRHQVAEVTSLGLVQMTRKRVGTGLL
EAYSTTCEHCRGRGVIVSTEPVGAVTGNGASGTAGAAAGNGTASHQHQHAAQAGAQANGA
GGSDKQNGSAPAQSRRSRPRGKGNVALDTVAETAAQAMEQVAEAQAPVENSRENGDAPRQ
GRRQTKAEARAEAKAAREADAARAAEEARAAEPAGEPPAAEVVEKPAAEPARRNGHAVRT
PAAAQETVVEPVAPAEPAATPAAAPARRQRRRAAARPAGPPKGSQTDNA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacgcgcccgctgacgagcgcagcggggttgccgatgcacgggcaggcgggacg
gaactgcccgccaagctgcgagtgcacgccttggcgaagctgctggaggtacgaagcaag
gacgtgttgactgcgctggaggcgttgggggccgaggttcgcagcgcccagtcgagcgtg
tcccgcgacctggcacttcaggtgatcgagaagctggcgcccgccgaggaggccgccggg
accccgagcgcggccgccgaggagtctgccgccgctgccgagcagcccgccgaggactcc
ggtccgagggctgccgccgcaccggtcttcgcgccgccgcagccggtcttcctcccgccg
cagcccgcggcggcgcccgccgctcgccaggcacccgccaagcaggccgcagcgaagcag
ccgcaggctgccgagccggtcgaacaggccgtagtctccccctcggcgcccgaggacgtc
gacgaggacgaagacgcaggcagcaggcgtcgccgccgacgcggacgccggggacggggc
cgaggacgaggcggccaggacgcggagggcggcgaggagcccggcgacgacgaggacggc
acgcccgccgagaccgccgctgacgtcgtgcccgaggcccctgcggaggagcaggcggcc
gccgagcaggacggagaggacaccgagggcgagcagtcggagggcagcaggcgccgtcga
cgtcgcaggcggcggaagggcactgccgaggacgacgcggcctcgcggtccgacgacccg
ccgaacacggtggtgcacgtcagggagagcaagcccgcgcaggtcaaggccgagccagtc
gtcgaggacgaggtccgttcggtacgcggctccacccgtctggaggccaagcgccagcga
cggcgcgacggccgggaggcgggccgcaggcgcgtgccggtgctgtcggaggccgagttc
ctggctcgtcgtgagtcggtggaacgtcggatggtcgtgcgtgagcgcggcgaccgcacg
cagatcgcggtgctggaggacggcgtcctcgtcgagcacttcgtgacgtcgtcgggcacc
ggatcgatcgtgggcaacgtctacctcggccgagtccagaacgtgctgccgagcatggag
gccgcgttcgtcgacatcggccgcggccgtaacgccgtgctctacgcgggcgaggtcgac
tgggacgccgcaggcctggagggcaaggcccgcaagatcgagcaggcgctgtccaccggg
gacagcgtgctggtccaggtcaccaaggagccggtcgggcacaagggcgcccgcctgacc
acccagatcagcctccccgggcgattcctggtctacgtgcccggcggcggtgccaccggc
atcagccggaagctccccgacgtcgagcgcaagcggttgaaggagatcctcaagcggatc
gtccccgacgaggcaggtgtgatcatccgcaccgcgtcggagggcaccagcgaggagtcc
ctggatcgggacgtccgcaggctgcgtgcccagtgggagatcatcaaggagcgggccgcc
attccgcgcgcccaggcgccgcaactgctgtacgaggagccggacctgctcatcaaggtc
gtccgtgacctcttcaccgaggacttctccggcctggtcgtccagggcgacaccgcgtgg
gacaccatcgagtcgtacgtgaaccacgtggcgccggatctggtgggcaggctccgcagg
cacgtcggcctgaaggacgccttcaccgagcaccgggtggacgagcagctggccaaggca
ctggatcggaaggtttggctgccctccggcggttacctggtgatcgaccgcaccgaggcg
atgacggtcgtcgacgtcaacaccggcaagttcaccggctccggcggaaacctggaggag
acggtcaccaggaacaacctggagtcggtggaggagatcgtccggcagctccggctgcgg
gacatcggcggcatcatcgtcatcgacttcatcgacatggtcctggagtccaaccgtgac
ctcgtgctgcgcaggctgaccgagtgcctcggccgggatcgcactcggcaccaggtcgcc
gaggtgacctccctggggctggtgcagatgacgcgtaagcgcgtcggcaccgggttgctc
gaggcctacagcaccacctgtgaacactgccggggtcgcggggtgatcgtctcgaccgag
ccggtcggcgcggtgacgggcaacggcgcgtcggggacggccggggcggccgcaggcaac
ggcacggcgagccaccagcatcagcatgcggcgcaggccggagcccaggccaacggcgcg
ggcggttcggacaagcagaacggcagcgctcctgctcagtcgcggcggtcgcggcccagg
ggcaagggcaacgtcgcgctcgacaccgtcgccgagacggcggcccaggcgatggagcag
gtcgccgaggctcaggcgccggtcgagaacagccgggagaacggcgacgcaccccgtcag
gggcgtcggcagaccaaggccgaggctcgggccgaggccaaggccgcccgtgaggccgac
gcagctcgcgcggcggaggaggcgcgtgcggccgagcctgcaggcgagccgcccgccgcc
gaggtggtcgagaagcccgccgccgagcccgctcggcgcaacgggcacgcggtgcggact
ccagcggcggcgcaggagacggtcgtcgagcctgtcgctccggcggagcccgccgcgacc
cctgcggcggcgcctgctcgcaggcagcgcaggcgtgccgcagcgcggccggcgggcccg
ccgaaggggagccagaccgacaacgcgtga
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