Actinoalloteichus sp. GBA129-24: UA75_10505
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Entry
UA75_10505 CDS
T04619
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acti
Actinoalloteichus sp. GBA129-24
Pathway
acti03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UA75_10505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acti03019
]
UA75_10505
03400 DNA repair and recombination proteins [BR:
acti03400
]
UA75_10505
Enzymes [BR:
acti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UA75_10505
Messenger RNA biogenesis [BR:
acti03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UA75_10505
DNA repair and recombination proteins [BR:
acti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UA75_10505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
APU20116
LinkDB
All DBs
Position
complement(2334462..2336303)
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AA seq
613 aa
AA seq
DB search
MASPVTTDPEVSEALQVLRRVFGYDSFRGDQAEIIDHVVGGGDALVLMPTGGGKSLCYQI
PALVREGVGIVVSPLIALMQDQVDALRALGVRAGFLNSSQDFDERREVESAFLAGELDLL
YLAPERLTVESTLRLLDRGTISLFAIDEAHCVAQWGHDFRPHYLELSMLHERWPDVPRIA
LTATATEATHTEIAARLNLGEARHFVASFDRPNIQYRIGLKNRAQQQLLELLRTEHADDA
GIVYCLSRNSVEKTAQFLVDNGFSAVPYHAKLDPAVRAANQARFLREDGVIVVATIAFGM
GIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWMAYGLQDVMQQRSMIDSSEGD
AAHRRKLATHLDAMLALCETVACRRVQLLAYFGQQSAPCGNCDTCLTPPESWDGTIPAQK
VLSTVYRLDRERDQRFGAGHVIDILLGRRTPKVEQHGHDSLKVFGVGTELRDTEWSGVVR
QLLAQGLLTVTGDYHVLVLTEASDAVLARQREVRLRREPERAARAAKPARSRKGAPAADL
AAEAVPVFERLRAWRSAAAKEQGVPAYVIFHDATLREIASREPSTLGELGTVSGVGENKL
AKYGQQILDTLTS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccggtgacgaccgatcctgaggtgagcgaggcgctgcaggtgctgcgccgg
gtcttcggctacgactccttccgaggcgaccaggcggagatcatcgatcacgtcgtgggc
ggcggcgacgccctcgtgctgatgcctaccggcggcggcaagtcgctctgctatcagatc
ccggcgctggtccgcgagggtgtgggcatcgtcgtctcccccctcatcgcgctgatgcag
gaccaggtcgacgcgctgcgggcgctcggggtgcgcgcgggcttcctcaactccagccag
gacttcgacgagcgacgcgaggtcgagtcggccttcctcgcgggtgaactggacctgctg
tatctggcgccggagcggctcaccgtcgagtcgacgctgcggctgctcgaccggggcacg
atctcgctgttcgccatcgacgaggcgcactgcgtcgcgcagtgggggcacgacttccgc
ccgcactacctcgaactgtcgatgctgcacgagcgctggccggacgtgcccaggatcgcg
ttgaccgcgacggcgacggaggccacgcacaccgagatcgccgcgcgactgaacctcggc
gaggcccggcacttcgtcgccagcttcgaccgccccaacatccagtaccgcatcgggttg
aagaaccgggcccagcagcagctgctcgaactgctgcgcaccgaacacgccgatgatgcg
ggcatcgtctactgcctgtcgcgcaactccgtcgagaagacggcccagttcctggtggac
aacgggttttcggccgtgccctatcacgcgaagctcgatccggcggtccgcgcggcgaac
caggcgcggttcctgcgggaggacggggtgatcgtggtcgccaccatcgccttcggcatg
ggcatcgacaagccggacgtgcggttcgtcgcccacctcgatctgccgaagtccgtcgag
ggctactaccaggagaccggccgggccgggcgggacgggctgccgtccacggcgtggatg
gcctatggactccaggacgtcatgcagcagcgcagcatgatcgactcctcggagggcgac
gcggcccatcgccgcaagctcgccacccacctggacgcgatgctggcgctctgcgagacg
gtggcctgtcgccgggtccaactgctcgcctacttcggccagcagagcgcgccctgcggc
aactgcgacacctgcctgacgccgccggagtcctgggacggcacgatccccgcgcagaag
gtcctctccacggtgtaccggctggaccgcgaacgtgatcagcgcttcggcgcgggccac
gtcatcgacatcctgctgggcaggcggacgcccaaggtcgaacagcacggccacgactcg
ctgaaggtcttcggcgtcggcaccgaactgcgggacaccgagtggagcggcgtggtgcgc
caactcctggcccagggactgctgacggtgaccggcgactatcacgtgctggtgctcacc
gaggccagcgacgcggtgctggcccggcagcgcgaggtccggctccgccgcgagccggag
cgggccgcgcgcgccgccaagccggccaggagtcgcaagggggcgcccgcggccgacctc
gccgccgaggcggtcccggtcttcgagcggctgcgggcctggcggtcggccgctgcgaag
gaacagggtgtaccggcctatgtgatcttccacgacgcgacgctccgcgagatcgcctcc
cgcgagccgtcgaccctgggcgagctgggcacggtcagcggcgtcggcgagaacaagctg
gcgaagtacggccagcagatcctggacacgctcacatcgtga
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