Actinoalloteichus sp. GBA129-24: UA75_24320
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Entry
UA75_24320 CDS
T04619
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
acti
Actinoalloteichus sp. GBA129-24
Pathway
acti00040
Pentose and glucuronate interconversions
acti01100
Metabolic pathways
acti02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
acti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
UA75_24320
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UA75_24320
Enzymes [BR:
acti01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
UA75_24320
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Glyco_hydro_28
Motif
Other DBs
NCBI-ProteinID:
APU22846
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Position
5703887..5704876
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AA seq
329 aa
AA seq
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MSSFSTNTSKSARNRTALLAAAGALLLTMTSVTAAAADQAVPAADPGILQSGPIGWASQN
GGTTGGAGGSTVTVTSASALISNMQASGPRIVQVSGTINLSGMNDIASDKTLVGINNARI
NGGGIDVDGAHNVIIRNITFAGATDDSVNVQDASTNIWIDHNTFLPGYDGSLDIKRESDF
VTVSWNHFDGTDKTSLLGHSDSFSADADNLRVTYHHNFYDNTNTRNPRIRYGRGVHVFNN
YYLNSNEYGIASTENASVLVEANYFQGVDTPTEVGYASSDPGDLVERNNIYSNSGTPNTR
GSFVGVPYSYSPASASSIPSLVSNGAGVS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctttctcaacgaatacgtcgaagtccgccaggaatcggacggccctgttggcc
gcagccggcgccctgctgctcaccatgacgagtgtgaccgccgccgcagccgaccaggcc
gtgcccgccgccgaccccggcatcctgcagtccggcccgatcggctgggcgtcgcagaac
ggcggcaccaccggcggcgcgggcggctccaccgtcacggtgacctcggcctccgcgctc
atcagcaacatgcaggcgtccggcccgcgcatcgtgcaggtgagcggcacgatcaatctg
agcgggatgaacgacatcgcctccgacaagaccctggtcggcatcaacaacgcccggatc
aacggcggcggcatcgacgtcgacggcgcgcacaacgtcatcatccgcaacatcaccttc
gcgggcgccaccgacgactcggtcaacgtgcaggacgcatcgaccaacatctggatcgac
cacaacacgttcctgcccggctacgacggctcgctggacatcaagcgcgagtccgacttc
gtgaccgtctcctggaaccacttcgacgggacggacaagacctcgctgctcggccacagc
gacagcttcagcgccgacgccgacaacctgcgggtgacgtaccaccacaacttctacgac
aacaccaacacccggaacccgcgcatccgctacggccggggcgtgcacgtcttcaacaac
tactacctgaacagcaacgagtacggcatcgcctcaacggagaatgcgtcggtgctggtc
gaggccaactacttccagggcgtggacacgcccaccgaggtcggctacgccagctccgac
cccggcgacctcgtcgagcgcaacaacatctactccaactcgggcacgcccaacaccagg
ggcagcttcgtcggagttccgtactcctacagcccggcctcggcgtcgagcatcccgtca
ctcgtgagcaacggcgcgggcgtctcgtga
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