Actinoplanes sp. L3-i22: L3i22_002790
Help
Entry
L3i22_002790 CDS
T08939
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
actl
Actinoplanes sp. L3-i22
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actl03032
]
L3i22_002790 (topA)
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_002790 (topA)
Enzymes [BR:
actl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L3i22_002790 (topA)
DNA replication proteins [BR:
actl03032
]
Prokaryotic type
DNA Topoisomerases
L3i22_002790 (topA)
DNA repair and recombination proteins [BR:
actl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L3i22_002790 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BCY05191
LinkDB
All DBs
Position
306361..309186
Genome browser
AA seq
941 aa
AA seq
DB search
MPSDARLTRLVIVESPSKAKTIAGYLGPDYLVEASVGHIRDLPRNADEVPEEFKGQAWAR
LGVDVDNGFHALYVISEGRKQQVAKLRRLAKEVDEIFLATDEDREGEAIAWHLVETIKPK
VPVKRMVFHEITKPAIQAAVANPRDIDRSLVDAQEARRILDRLYGYEVSPVLWKKVMRGL
SAGRVQSVATRIVVERERQRMAFRSAEYWDILAQLSIVGPAEGARSFQATLIALDGDRIA
TGKDFEPTTGQLKTGSGAVQLDGAGARGLAARLEGRPFTVTRVEEKPYRRKPYAPFITST
LQQEAARKLRLSSKQTMSVAQSLYEKGYITYMRTDSVNLSETAIAAARRQIGELYGANNV
PPQPRRYTTKAKNAQEAHEAIRPSGDNFRTPGEVAKELNSEEFRLYELIWRRTIASQMTD
AVGNSVSVRIRAITTSNEEADFSASGKTITDPGFLRAYVESSDDENAEAEDAERRLPNLV
KDQPLTADELNALGHHTIPPARYTEASLVKALEELGIGRPSTYSSIMQTIQDRGYVEKRG
QAMIPSFLAFAVIGLLEGHYPQLVDYNFTAAMEGQLDDIAAGDGTQLDFLTSFYFGSQAP
GADKEIARAGGLKKMVTENLSAIDAREVNSIPLFTDEENRQVLVRVGKFGPYLQRKAAVI
AEGEEEPAEDRASIPEGVAPDELTPEKVAELFLAGNGDKALGDDPATGEAVVVKSGRYGA
YVQSGERSSSLFASQSPQTLTLEQALQLLTLPRTVGKDAEGNEIVARNGRYGPYISRLKD
SRSLDSEDRLFTVTLDEALALLAEPKTRGQRGAAKPPLRDLEGVDPVSEKPLVVKDGRFG
PYVTDGETNVTLRRGQTPEELTLAQAIEMIAEKRAKGPAPKKTTARKTTAKKAEPAKKAA
ATKKATPAKKAAPAKKAAAAKKAAPAKKTTAAAKKAAASAE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagtgacgccaggttgacccgtctggtcatcgtcgagtctccgtcgaaggccaag
acgatcgccggttacctgggccccgactatctcgtcgaggcctccgtcggccatatccgt
gacctgccgcgtaacgcggacgaggtgccggaggagttcaagggccaggcctgggcccgg
ctcggggtcgacgtcgacaacggtttccacgccctctacgtgatctccgagggccgaaag
cagcaggtggcgaagctacgccggctggccaaggaggtcgacgagatcttcctcgccacc
gatgaggaccgcgagggcgaggccatcgcctggcacctggtcgagacgatcaagcccaag
gtgccggtcaagcggatggtcttccacgagatcaccaagccggccatccaggccgcggtg
gccaacccgcgcgacatcgaccgttccctggtcgacgcgcaggaggcccgccgcatcctg
gaccggctgtacggctacgaggtcagcccggtcctgtggaagaaggtcatgcgtggcctc
tccgccggccgcgtgcagtccgtcgccacccggatcgtggtcgagcgtgagcgccagcgg
atggccttccgctccgcggagtactgggacatcctggcccagctctcgatcgtgggcccg
gccgagggcgcccggtccttccaggcgacgctgatcgcgctggacggcgaccggatcgcc
accggcaaggacttcgagcccaccaccgggcagctgaagaccggctcgggcgcggtccag
ctggacggcgccggcgcccgcgggctggccgcccgtctggagggccgcccgttcacggtc
acccgggtcgaggagaagccgtaccggcgtaagccgtacgcgccgttcatcacctcgacg
ctgcagcaggaggcggcccgcaagctgcgcctctcctcgaagcagacgatgagcgtggcg
cagagcctgtacgaaaagggctacatcacctacatgcgtaccgactcggtgaacctctcc
gagaccgccatcgcggccgcccgccggcagatcggcgagctctacggggcgaacaatgtg
ccgccgcagccgcgccgctacaccaccaaggcgaagaacgcgcaggaggcgcacgaggcg
atccgcccgtccggggacaacttccggacccccggcgaggtcgccaaggagctgaactcg
gaggagttccgcctctacgagctgatctggcgccggaccatcgcgtcccagatgaccgac
gcggtcggcaactcggtgagcgtccggatccgggcgatcaccacctcgaacgaggaggcc
gacttctcggcgtccggcaagacgatcaccgaccccggcttcctccgggcgtacgtggag
tcctccgacgacgagaacgccgaggccgaggacgccgagcgccgcctgccgaacctggtg
aaggaccagccgctgaccgccgacgagctgaacgcgctgggccaccacaccatcccgccg
gcccggtacacggaggcctcgctggtcaaggcgctggaggagctcggcatcggccgcccc
tccacgtactcgtcgatcatgcagaccatccaggaccgcgggtacgtggagaagcgcggc
caggcgatgatcccgtcgttcctggcgttcgcggtgatcggtctgctcgaagggcactac
ccacagctggtggactacaacttcaccgccgcgatggagggccagctcgacgacatcgcc
gccggtgacggcacccagctggacttcctcacctcgttctacttcggcagccaggcgccc
ggtgcggacaaggagatcgcccgggccggcggcctgaagaagatggtcaccgagaacctc
agcgcgatcgacgcgcgggaggtcaactcgatcccgctcttcaccgacgaggagaaccgt
caggtcctcgtccgggtcggcaagttcgggccgtacctgcagcgcaaggcggccgtgatc
gccgagggcgaggaggagccggccgaggaccgcgcctcgatcccggagggcgtggccccc
gacgagctcaccccggagaaggtggccgagctcttcctcgccggcaacggcgacaaggcg
ctcggcgacgacccggcgaccggcgaggcggtggtggtcaagtccggccgctacggggcg
tacgtgcagagcggcgagcgcagctcgtccctgttcgcctcgcagtcgccgcagacgctg
acgctcgagcaggcgctgcagctgctcacgctgccccggacggtcggcaaggacgccgag
ggcaacgagatcgtcgcgcgcaatgggcggtacgggccgtacatctcccggctgaaggac
tcgcgctcgctggatagcgaggaccggctcttcacggtcacgctggacgaggcgctggcc
ctgctggccgagccgaagacccggggtcagcggggtgcggccaagccgccgctgcgggac
ctggagggcgtcgacccggtgtcggagaagccgctggtggtcaaggacggccgcttcggg
ccgtacgtgaccgacggcgagacgaacgtgacgctgcggcgcggtcagacccccgaggag
ctgaccctcgcgcaggcgatcgagatgatcgccgagaagcgggcgaagggtccggcgccg
aagaagaccacggcgcgcaagaccacggcgaagaaggccgagccggccaagaaggcggcc
gcgaccaagaaggccaccccggcgaagaaggcggcgccggccaagaaggccgccgcggcg
aagaaggcggcgccggccaagaagacgaccgccgcggccaagaaagccgcggcgtccgcc
gagtaa
DBGET
integrated database retrieval system
