KEGG   Actinoplanes sp. L3-i22: L3i22_004040
Entry
L3i22_004040      CDS       T08939                                 
Name
(GenBank) hypothetical protein
  KO
K03090  RNA polymerase sigma-B factor
Organism
actl  Actinoplanes sp. L3-i22
Brite
KEGG Orthology (KO) [BR:actl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:actl03021]
    L3i22_004040
Transcription machinery [BR:actl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L3i22_004040
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_Crp_2 HTH_10 HTH_23 GerE DUF134 DUF7343 HTH_3 MarR NirdL-like_HTH HTH_24 Sigma70_ECF MarR_2 HTH_31 HTH_AraC HTH_Tnp_4 HNF-1_N HTH_37
Other DBs
NCBI-ProteinID: BCY05316
LinkDB
Position
complement(435424..436236)
AA seq 270 aa
MTVMETSTTVAPATAASANKPVDSAAELLNAMAAMPAGHPSRASLRDQAIEAWLPLARHL
ANRYSGRGEPTDDLVQTATVGLIKAVDKFDPERGVDFAGYAIPTIIGEIKRHFRDRTWSV
RVPRRLQELRLAITEANSTLTHSLGRSPTVPDIAVHLGISEEEVLEGLEGARAYNATSLS
TPISADGSTELGDTLGGEDYEFELAETRVALAPALATLDEREQRILTLRFYGNLTQAQIA
DQIGISQMHVSRLLTKALAKLRNQLAATTL
NT seq 813 nt   +upstreamnt  +downstreamnt
atgaccgtcatggagacttcgacgaccgtcgccccggcgacggccgccagcgccaataag
cccgtcgacagcgccgcggaactgctcaacgcgatggctgcgatgccggccgggcacccg
tcccgggcgtcgctccgcgaccaggcgatcgaggcgtggctgccgctcgcccgccacctc
gccaaccgttactccggccgcggcgagccgaccgacgacctggtccagaccgcgacggtc
ggcctgatcaaggcggtcgacaagttcgaccccgagcgcggcgtcgacttcgccggctac
gcgatcccgaccatcatcggcgagatcaagcgccacttccgggaccggacctggtccgtc
cgggtgccgcgccgcctgcaggaactccgcctcgcgatcaccgaggcgaacagcacactg
acccacagcctcggccggtccccgaccgtcccggacatcgcggtgcacctcggcatcagc
gaggaagaggtgctggagggcctggaaggcgcccgcgcctacaacgcgacgtcgctctcc
acgccgatcagcgccgacggctcgaccgagctcggcgacacgctcggcggcgaggactac
gagttcgagctcgccgagacccgcgtggcgctcgcgccggcgctggccaccctcgacgag
cgtgagcagcggatcctcacgctgcggttctacggcaacctgacccaggcgcagatcgcc
gaccagatcgggatctcccagatgcacgtctcccgcctgctcaccaaggcgctggccaag
ctgcgcaaccagctggccgccacgaccctctga

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