Actinoplanes sp. L3-i22: L3i22_005490
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Entry
L3i22_005490 CDS
T08939
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3i22_005490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actl03019
]
L3i22_005490
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_005490
Enzymes [BR:
actl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3i22_005490
Messenger RNA biogenesis [BR:
actl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L3i22_005490
DNA repair and recombination proteins [BR:
actl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L3i22_005490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
Motif
Other DBs
NCBI-ProteinID:
BCY05461
LinkDB
All DBs
Position
597071..599215
Genome browser
AA seq
714 aa
AA seq
DB search
MTETTRMTADAAERASVRERAEEVLRRLAGEHARLREDQWRAIEALTIDRRRVLCVQRTG
WGKSAVYFVATALLRAGGTTGPTVIVSPLLALMRNQVDAAARAGIRARTINSANLEEWSE
IEREIRAGTVDVLLISPERLNNPDFRDNVLPGLAHSTGLLVVDEAHCVSDWGHDFRPDYR
RLRTFLEGLPGRTPVLATTATANSRVTADVADQLGDALVLRGPLGRDSLRLAALRLPDAS
HRLAWLVDHLDQLPGSGIIYTLTVAGATETADFLRSRGFPVASYTGQLDDAERRAAEQDL
LDNKIKALIATSALGMGYDKPDLGFVVHLGAPNSPIAYYQQVGRAGRAVEHAEVVLLPGP
EDAAIWRYFASLAFPPEDQVRAVLAQLSADRAMSTQALEPLVDMRRTRLELMLKVLDVDG
AVRRTRGGWLATGRQWDYDTARLQRVAEARDAEQKTMIEYAVTSACRMEFLRRCLDDPEA
TPCGRCDNCAGPLFDAEVSSSSLAAAEAFLGRPGVEIAPKKMWPTGLAAIGISLKGKIGP
SEQIKQGRSVGRLSDLGWGTRLRGVVGPESPDAPIPAELAAAVVEVLKAWARGEDAWEQR
PVGVVAVGSHRHPQLVHSLAEHISTVGRLPLLGALNAVRSGAESYRGNSAQRVRALHDAF
IVPPEVAAGIQAQPGPILLVDDLVDSGWTMALAGRAVRKAGAESILPLALAVAG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagacgacgcggatgacggctgatgcggccgagcgggcgagtgtgcgggagcgc
gccgaggaggtgctgcgccggctcgccggagagcacgcgagactgcgtgaggatcagtgg
cgcgccatcgaggcgctcaccatcgaccgtcgccgggtgctctgcgtgcagcgcaccggg
tggggcaagtcggcggtctacttcgtggccaccgcactgctgcgggccggcgggacgacc
gggccgacggtgatcgtgtcccctctgctcgccctgatgcgcaaccaggtggacgccgcg
gcccgggccggcatccgcgcccgcaccatcaactcggcgaacctggaggagtggtccgag
atcgagcgggagatccgggccggcacggtggacgtgctgctgatcagcccggagcggctg
aacaatccggacttccgggataacgtgctgcccggtctcgcgcacagcaccggcctgctc
gtggtcgacgaggcgcactgcgtctccgactgggggcacgacttccggccggactaccgg
cggttgcggacgttcctggagggcctgcccggccgcacgccggtgctcgccaccaccgcg
accgccaactcccgcgtcaccgccgacgtcgccgaccagctcggtgacgccctggtgctg
cgtgggccgctgggccgtgactcgttgcgcctggcggcgttgcgactgcccgacgcgtca
catcggctggcctggctcgtcgaccatctcgaccagctgcccggctcgggcatcatctac
acgctgaccgtggccggggccaccgagaccgccgacttcctgcgctcacgcgggttcccc
gtggcgtcctataccggccagctggacgatgccgagcgccgcgccgccgagcaggacctg
ctggacaacaagatcaaggcgctgatcgcgacgtccgcgctcggtatgggttatgacaag
ccggatctggggttcgtcgtgcacctgggcgcgccgaattcgccgatcgcctactaccag
caggtcggccgggccggccgggccgtcgagcacgccgaggtggtgctgctccccggcccg
gaagacgccgcgatctggcgatacttcgcctccctggccttcccgcccgaggatcaggtg
cgggcggtgctggcgcagctctccgccgaccgggcgatgtccacccaggccctggagccg
ctggtcgacatgcggcgcacccggctggagctgatgctcaaggtgctcgacgtggacggc
gcggtgcggcgcacccgtggcggctggctcgccaccggccgacagtgggactacgacacc
gcccgattgcagcgcgtcgccgaggcccgggacgccgaacaaaaaaccatgattgagtac
gcggtgacctccgcctgccggatggagttcctccgccgctgcctggacgatccggaggcg
acgccgtgcgggcggtgtgacaactgcgcggggccgctcttcgacgccgaggtgtcgtcg
agctcgctggcggccgcggaggcgttcctcgggcgccccggcgtggagatcgcgccgaag
aagatgtggcccaccggtctggccgcgatcggcatctcgctgaagggcaagatcgggccg
agcgagcagatcaagcagggccggtccgtgggacgcctgtccgacctgggctggggcacg
cggctgcgtggcgtggtcgggccggagtcgccggacgcgccgatcccggccgagctggcc
gcggcggtggtcgaggtgctcaaggcctgggcgcgcggggaggacgcctgggagcagcgc
ccggtcggggtcgtggcggtcggctcgcaccgtcatccacagcttgtccacagcctcgcc
gagcacatctcgacggtggggcggttgccgctgctcggggcgttgaacgcggtgcggtcg
ggggcggagagttatcgcgggaacagtgctcagcgggttcgggcgctgcatgacgccttc
atcgttccgccggaggtcgccgcggggatccaggcgcagcccggcccgatcctgctcgtc
gacgacctggtcgactccggttggacgatggcgttggctgggcgcgcggtgcgtaaggcc
ggtgccgagtcgattctgccgttggcgctcgccgtggccggctga
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