Actinoplanes sp. L3-i22: L3i22_007960
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Entry
L3i22_007960 CDS
T08939
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L3i22_007960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_007960
Enzymes [BR:
actl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
L3i22_007960
DNA repair and recombination proteins [BR:
actl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L3i22_007960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCY05708
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All DBs
Position
852218..852970
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AA seq
250 aa
AA seq
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MQPSESSPRTPQGVVAQAAEAASLSVLDARIADCFACSRLVEWRTEVARVKRASFRDQDY
WGRPLPGFGPAGASIAILGLAPAAHGGNRTGRMFTGDRSGDVLFAALHRAGLANQPTSVA
ADDGLELRHTRIFAAVRCAPPDNKPTPAERDTCAPWVRRELELIKPTLRAVVTLGAFAWA
AWWPAMRSAYGVKPPVPRPKFGHGAEVHLPGVPPVLGCFHVSQQNTFTGRLTPDMLDVVF
TRAKALAGLA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaccgtccgagtcctcaccgcgtacccctcagggggttgtcgcacaggcggccgag
gccgcctcgctgagcgtgctcgacgcccgcatcgcggattgttttgcctgttcacggctg
gtcgagtggcgcaccgaggtggcccgggtcaagcgggcgtcgttccgcgaccaggactat
tggggccgcccgctaccgggcttcggcccggccggcgcctcgatcgcgatcctcggcctg
gcccccgccgcgcacggcggcaaccgcaccggccggatgttcaccggcgaccgctccggc
gacgtgctgttcgccgccctgcaccgggccggcctggccaaccagccgaccagcgtcgcc
gccgacgacggcctcgagctgcggcacacccggatcttcgcggcggtgcggtgcgcgccg
ccggacaacaagcccacgccggccgagcgcgacacctgcgccccctgggtccgccgcgag
ctggaactgatcaaacccaccctgcgggcggtggtcaccctgggtgccttcgcctgggcc
gcctggtggccggcgatgcgatcggcgtacggcgtgaagccccccgtcccgcgtccgaaa
ttcgggcacggcgccgaggtccacctgcccggcgtgcccccggtgctcggctgtttccac
gtcagtcagcagaacaccttcaccggccggctcacccccgacatgctcgacgtggtgttc
acacgtgccaaggctctggcgggcctggcatga
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