Actinoplanes sp. L3-i22: L3i22_013030
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Entry
L3i22_013030 CDS
T08939
Symbol
holA
Name
(GenBank) hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl03030
DNA replication
actl03430
Mismatch repair
actl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3i22_013030 (holA)
03430 Mismatch repair
L3i22_013030 (holA)
03440 Homologous recombination
L3i22_013030 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actl03032
]
L3i22_013030 (holA)
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_013030 (holA)
Enzymes [BR:
actl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3i22_013030 (holA)
DNA replication proteins [BR:
actl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L3i22_013030 (holA)
DNA repair and recombination proteins [BR:
actl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L3i22_013030 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BCY06215
LinkDB
All DBs
Position
1412763..1413746
Genome browser
AA seq
327 aa
AA seq
DB search
MAPVNAAPPPSLLLVQGDEELLSARAVTAAVDAARAADPGADVREYEAGQLNPGEVAEML
SPSLFGGRRALVLRNGQDARKELVAVLLAYAKNPDPEVTLIVTHPGGAKGKAFADGLQKA
GATVVPVMKLKGDRERIAFVRDEFRRSGGWCDEATAAALLAAVGNDLREIAAACSQLIAD
TDGKVTEAVVARYYKGRAEVSGFTVADAAMVGDLPGALEALRWAMHVGVDPVPIADALAD
GVRTVARVASAGKGNPYQLASTLGMPAWKIQRAQERSRGWTPDGLVDAMRAAAVCNAAVK
GGAEDRGFALEQAVFAVAAARRSGGAR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgtgaacgccgcgccaccaccctcgttgctgctcgtccaaggcgatgaggaa
ctcctctccgcccgtgccgtcaccgcggcggtggacgcggcgcgcgctgccgaccccggc
gcggatgtccgggaatatgaagccggccagctcaatccgggcgaggtcgccgagatgctc
agcccgtccctgttcggcgggcgccgcgcgctggtcctccgcaacggtcaggacgcgcgc
aaggagctcgtcgccgtcctgctggcctatgcgaagaacccggaccccgaggtcaccctg
atcgtcactcatccgggcggcgccaagggcaaggcgttcgccgacggcctgcagaaagcc
ggcgccaccgtcgtcccggtgatgaagctcaagggcgaccgggagcggatagccttcgtc
cgcgacgagttccgccgctccggcggctggtgcgacgaggcgaccgcggccgcgctgctc
gccgcggtcggcaacgacctgcgggagatcgcggcggcctgctcccagctgatcgccgac
accgacggcaaggtgaccgaggcggtcgtcgcgcgctactacaagggccgggccgaggtc
agcggcttcacggtggcggacgcggcgatggtcggcgacctgccgggcgcgctcgaggcg
ctgcgctgggcgatgcacgtgggtgtcgacccggtgccgatcgcggacgcgctggccgac
ggcgtgcggacggtggcgcgggtcgcctcggccgggaagggcaatccgtaccagttggcg
agcacgctcggcatgccggcctggaagatccagcgggctcaggagcgcagccgcggctgg
acaccggacggcctggtcgacgcgatgcgcgcggccgccgtctgcaacgccgcggtcaag
ggtggcgccgaggaccgcggcttcgcgctggaacaagccgtcttcgcggtcgccgcggcg
cggcggagcggtggtgcccgatga
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