Actinoplanes sp. L3-i22: L3i22_016040
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Entry
L3i22_016040 CDS
T08939
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl03030
DNA replication
actl03430
Mismatch repair
actl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3i22_016040 (dnaQ)
03430 Mismatch repair
L3i22_016040 (dnaQ)
03440 Homologous recombination
L3i22_016040 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actl03032
]
L3i22_016040 (dnaQ)
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_016040 (dnaQ)
Enzymes [BR:
actl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3i22_016040 (dnaQ)
DNA replication proteins [BR:
actl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L3i22_016040 (dnaQ)
DNA repair and recombination proteins [BR:
actl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L3i22_016040 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
BCY06516
LinkDB
All DBs
Position
complement(1732336..1734150)
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AA seq
604 aa
AA seq
DB search
MLPAVAQPAYVQGTLDTLLSADGSVDPAALSLADTTFVVLDLETTGGAPDGGGITEIGAV
KVRSGELLGEFGTLVNPGVPLPPFITVLTGITEAMLRPAPAIEAVLPGLLEFLRGAVLVA
HNAPYDVGFLKAACAAHGYPWPSPRVLDTAALARRALTRDEVPNRKLGTLAQFFRSTVEP
NHRALDDAKATVDVLHGLIERLGSFRVHTLGDAIEFAKTITPAQRSRRHLADNLPRVPGV
YIFRAADDRPLYVGKSNDISTRVKSYFTAAEKRSRISSEMLTAAVRVEAVECAHSLEAEV
RELRLIAAHAPPYNRRSKYPERMVWLKLTAEAFPRLSVVRRFAEDGATYLGPFTSRRTAE
LAAAGVYDAVPLRQCNHKLSLRTRTPACALAELGRCPAPCEHEISPAEYDLRAALPFRTA
TSGDPGPVIEAILARIDTLSDKQRYEEAATVRSRLIALLRALIRMQRLNALTRLPEIVAA
RRDDKGGWEIVVVRHGRLAAAATSPPRAHPRPTLDAARLTAETVLPGPGPVASATPEETE
RILAWLERVDTRLVETSGDWVSPARGAARFAALLSRAESAASAQDSTVRLSVTDRSDDAR
SLRL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcccgccgtggcacaaccggcttatgtgcagggcactctggacacgctgctgtcc
gccgacggttcggtcgatccggccgcgctgtccctggcggacaccacgttcgtcgtgctc
gacctggagaccaccggcggcgctccggacggtggcgggatcaccgagatcggcgcggtc
aaggtgcgttcgggtgaactcctcggcgagttcggcaccctggtcaacccgggggtgccg
ctgccgccgttcatcaccgtcctgaccggcatcaccgaggcgatgctgcgcccggcgccg
gcgatcgaggcggtgctgccgggcctgctggagttcctgcgcggcgcggtcctggtcgcc
cacaacgcgccgtacgacgtcggtttcctcaaggcggcctgcgccgcgcacggctatccg
tggccgtcgccccgggtgctggacaccgcggccctggcccggcgcgcgctgacccgtgac
gaggtgcccaaccgcaagctcggcacgctggcccagttcttccgttccacggtcgagccg
aaccaccgcgccctggacgacgcgaaggcgaccgtcgacgtgctgcacgggctgatcgag
cggctgggcagcttccgggtgcacacgctgggcgacgcgatcgagttcgccaagacgatc
accccggcccagcgcagccggcggcacctggccgacaacctgccgcgggtgcccggggtc
tacatcttccgggccgccgacgaccggccgctctacgtcggcaagtccaacgacatctcg
acccgggtgaagagctatttcaccgccgccgagaagcgctcgcggatctcctccgagatg
ctgaccgcggcggtgcgggtggaggcggtggagtgcgcccactcgctggaggccgaggtc
cgggagttgcgcctgatcgccgcgcatgcaccgccgtacaatcggcggtccaaatatccc
gagcggatggtctggctgaagctcaccgcggaggccttcccgaggttgtcggtggtccgg
cggttcgccgaggacggtgcgacctatctgggcccgttcacctcgcggcgcaccgccgag
ctggccgccgccggggtctacgacgcggtgccgttgcgacagtgcaaccacaagctctcg
ctgcgcacccgcaccccggcgtgcgcgctggccgagctgggccgctgccccgcgccgtgc
gagcacgagatctccccggcggagtacgacctgcgcgccgccctcccgttccggaccgcc
acctcgggcgacccgggcccggtgatcgaggcgatcctggcccggatcgacacgctgagc
gacaagcagcggtacgaggaggccgccaccgtccggtcccgcctgatcgccctgctccgc
gcgctgatccggatgcagcggctgaacgcgctgacccgcctgccggagatcgtcgccgcc
cggcgggacgacaagggcggctgggagatcgtggtggtccggcacggccggctggccgcc
gcggccacctcgccgccgcgcgcgcacccgcggcccaccctggacgcggcgcgcctgacc
gccgagacggtccttcccggaccgggcccggtggcgtcggcgacgcccgaggagaccgag
cggatcctggcgtggctggagcgggtggacacccgcttggtggaaacctccggcgactgg
gtgtcaccggctcgtggcgcggcgcgtttcgccgcgctgctaagcagggctgaatcggcc
gcatcagcccaagactcgaccgttcgcctatcggtaactgaccgttcggatgacgcccgc
tcgcttaggctgtaa
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