Actinoplanes sp. L3-i22: L3i22_028460
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Entry
L3i22_028460 CDS
T08939
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3i22_028460 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actl03019
]
L3i22_028460 (recQ)
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_028460 (recQ)
Enzymes [BR:
actl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3i22_028460 (recQ)
Messenger RNA biogenesis [BR:
actl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L3i22_028460 (recQ)
DNA repair and recombination proteins [BR:
actl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L3i22_028460 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
BCY07758
LinkDB
All DBs
Position
complement(3204010..3205923)
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AA seq
637 aa
AA seq
DB search
MSDAVDALNRVFGYPEFRGQQREIVEHVIGGGDALVLMPTGGGKSLCYQIPALVRPGTGV
VISPLIALMQDQVDALRTLGVRAGFLNSTQDYDERRLVEAEFVGGELDLLYVAPEGLGTP
GVQRLLDRGDISLFAIDEAHCVAQWGHDFRPDYLSLSMLHERWPDVPRIALTATATTATR
DEIAERLRLNDARHFTASFDRPNIQYRIVGKNEPKRQLLELLRTEHAGDAGIVYCLSRAS
VEKHAEFLSANGIPALPYHAGLSAQTRYENQSRFLREDGLVMVATIAFGMGIDKPDVRFV
AHLDLPKSVEGYYQETGRAGRDGLPSTAWLSYGLQDVVQLRKMIDSSDGDLNYRRNANRH
LDAMLALCETVTCRRTRLLAYFDQEAPATRCGNCDTCLTPPESWDGTVPAQKLLSTVFRL
KKERNQKFGAGQSIDILLGKRTDKVTQFRHDELSVFGIGADLRDTEWRGVVRQLLAGGYL
AVEGEYSTLVLTETSGVVLRGEVTLMMRREIPTQRLRGGGSASSSSRSRTPAAAPADFPA
EAEPLFESLRAWRASVAKEQAIPPYVIFHDKTLRAIATLEPSSLDQLGTVSGVGQSKLTK
FGADVLAVVRGETPPSALPDPDLGPDPEPDLIPDADL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacgccgtcgacgcgctcaaccgcgtcttcggctatccggagttccgtggtcag
cagcgcgagatcgtcgagcacgtgatcggcggcggcgacgcgctcgtgctgatgccgacc
ggcggcggcaagtcgctgtgctatcagatcccggcgctggtccggcccggcaccggcgtg
gtcatctcgccgctgatcgcgctgatgcaggaccaggtcgacgcgctgcgcacgctcggc
gtccgggccggcttcctcaactcgacgcaggactacgacgagcgccgcctggtcgaggcc
gagttcgtcggcggcgagctggacctgctctacgtcgcgccggaagggctcggcaccccc
ggcgtgcagcggctgctcgaccgcggcgacatctcgctgttcgcgatcgacgaggcgcac
tgcgtcgcccagtggggccacgacttccggcccgactatctctccctgtcgatgctgcac
gagcgctggccggacgtgccgcggatcgcgctgaccgccaccgcgaccaccgccacccgc
gacgagatcgccgagcgcctgcggctcaacgacgcccggcacttcaccgcgagcttcgac
cgccccaacatccagtaccggatcgtcggcaagaacgagccgaaacggcagctgctcgag
ctgctccgcaccgagcacgccggggacgccggcatcgtctactgcctctcccgggcctcg
gtggagaaacacgccgagttcctgtccgccaacggcatccccgcgctgccctaccacgcc
ggcctcagcgcccagacccggtacgagaaccagtcccggttcctccgggaggacggcctg
gtcatggtcgccaccatcgccttcggcatgggcatcgacaaacccgacgtgcgcttcgtc
gcccatctggacctgccgaagtccgtcgagggctactaccaggagaccggccgcgccggc
cgggacggcctgccctcgaccgcctggctctcctacgggctgcaggacgtggtccagctg
cgcaagatgatcgacagctcggacggggacctcaactaccgccgcaacgccaaccggcac
ctggacgcgatgctcgcgctgtgcgagacggtcacctgccggcgcacccggctgctggcc
tacttcgatcaggaggcgccggccacccggtgcggcaactgcgacacctgcctgaccccg
ccggagtcctgggacggcacggtgcccgcgcagaaactgctctccacggtgttccggctg
aagaaggagcgcaaccagaagttcggcgccggccagtccatcgacatcctgctcggcaag
cgcaccgacaaggtcacccagttccggcacgacgagctgagcgtcttcgggatcggcgcc
gacctgcgggacaccgagtggcgcggggtggtccggcaactgctggccgggggctacctg
gcggtcgagggggaatacagcacgctggtcctcaccgagaccagcggtgtggtgctgcgc
ggcgaggtgaccctgatgatgcgccgcgagatcccgacccagcggctccgcggcggcggc
tcggcgtcgtcgtcctcgcggtcgcgcacgccggcggcggcgcccgccgacttcccggcc
gaggccgagccgctcttcgagagcctgcgggcgtggcgggcctcggtcgccaaggagcag
gccatcccgccttacgtgatcttccacgacaagacgttgcgggcgatcgcgacgctggag
ccgtcgtccctcgaccagttgggcacggtgagcggcgtcggccagagcaaactcaccaag
ttcggcgccgacgtgctcgccgtggtccgcggcgagaccccgccctcagccctccccgac
cctgacctcggcccggacccggagcccgacctcatccccgacgccgacctctga
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