Actinoplanes sp. L3-i22: L3i22_031370
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Entry
L3i22_031370 CDS
T08939
Name
(GenBank) TetR family transcriptional regulator
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
actl
Actinoplanes sp. L3-i22
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
actl03000
]
L3i22_031370
Transcription factors [BR:
actl03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
L3i22_031370
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_31
TetR_N
TetR_C_6
TetR_C_28
Sf6_terminase
HTH_20
YNR034W-A-like
Motif
Other DBs
NCBI-ProteinID:
BCY08049
LinkDB
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Position
3526624..3527175
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AA seq
183 aa
AA seq
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MSEVRRTRRHDPGRRDRLIDAARRVIAERGVAGTTHREIARAADVPLGSMTYHFASLDEV
LAEAFSRHAAAAADVFDERLGAATDRDGAIEAVITLIRDDLIGSPNDLVMAVELYVAAAR
NPALRAVTQGWMQRSRDALERHFDPTTAREVDALIEGLVLHSVLSTDPMTPEQIRHAVER
YLR
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaggtccggcgcacccggcggcacgatccgggccggcgggaccggctgatcgac
gcggcccggcgggtgatcgcggagcgcggcgtcgccgggaccacgcaccgggagatcgcc
cgggccgccgacgtcccgctcgggtcgatgacctaccacttcgcgtcgctcgacgaggtg
ctcgccgaggcgttcagccggcacgccgcggccgccgccgacgtcttcgacgagcggctc
ggcgcggccaccgaccgggacggcgcgatcgaggcggtcatcacgctgatccgcgacgac
ctgatcgggtcgccgaacgacctggtgatggccgtcgagctgtacgtcgcggcggcccgc
aacccggcgctgcgggcggtcacccagggctggatgcagcgcagccgggacgcgctggaa
cggcacttcgacccgaccaccgcccgggaggtggacgcgctgatcgagggtctggtcctg
cacagcgtgctgtccaccgacccgatgaccccggagcagatccggcacgcggtcgagcgc
tacctccgctga
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