Actinoplanes sp. L3-i22: L3i22_072630
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Entry
L3i22_072630 CDS
T08939
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl00040
Pentose and glucuronate interconversions
actl01100
Metabolic pathways
actl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
L3i22_072630
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3i22_072630
Enzymes [BR:
actl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
L3i22_072630
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF5749
Motif
Other DBs
NCBI-ProteinID:
BCY12175
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Position
7988284..7989246
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AA seq
320 aa
AA seq
DB search
MSPSRRTVLAAATAGVLASAGGLVVAQSGPAFAAESSPVGFASLNGGTSGGSSSTVVTVT
SASALKSALSSSTSQTVRVSGLITISGMYSVASNKTIIGVGSSSGVTGGGFNLSSVKNVI
IRNLVFKNADDDSINLQEGTTNVWIDHNDLSNGYDGLIDIKRGSDYITVSWNHLHNHDKS
MLLGHSDDNSAQDLGHLRVTYVHNWFDGTNQRHPRVRFANPVHVLNNYYSNIGSYGVAST
ENAGVFVERNYFENVATPTVTQTGDSDSGNLKVLNNYKVNSGTEQVRNGASVAAIPYSYT
PEANSTVKATVTAGAGTGKI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgtcccgtcgtaccgtcctcgccgcggccaccgccggcgtcctggcctctgcc
ggcggcctggtcgtggcccagtccggcccggctttcgccgcggagtccagcccggtcgga
ttcgccagcctcaacggcggcacctccggcggctcgtcgagcaccgtcgtcaccgtgacc
tcggcatccgcgctcaagtcggcgctgagctcgagcacgtcgcagaccgtccgggtctcc
ggcctgatcacgatctccggtatgtacagcgtcgcgtcgaacaagacgatcatcggggtg
ggctccagctccggcgtcaccggcggcggcttcaacctgtccagcgtcaagaacgtgatc
atccggaacctggtgttcaagaacgccgacgacgactcgatcaacctccaggaaggcacc
accaacgtctggatcgaccacaacgacctgtcgaacggctacgacgggctgatcgacatc
aagcgtggctcggactacatcaccgtgtcgtggaaccacctgcacaaccacgacaagtcc
atgctgctcgggcacagtgacgacaacagcgcccaggacctcgggcacctgcgcgtcacc
tacgtccacaactggttcgacggcaccaaccagcggcacccgcgggtccggttcgcgaac
ccggtccacgtgctcaacaactactacagcaacatcgggtcgtacggggtggcctcgacc
gagaacgcgggcgtcttcgtcgagcgcaactacttcgagaacgtcgccacccccacggtc
acccagaccggcgactccgactccggcaacctcaaggtgctgaacaactacaaggtcaac
tcgggcaccgagcaggttcgcaacggcgccagcgtcgcggcgatcccgtactcgtacacc
cccgaggccaacagcaccgtcaaggccaccgtcacggccggcgcgggcaccggcaagatc
tga
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