Actinoplanes sp. L3-i22: L3i22_082680
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Entry
L3i22_082680 CDS
T08939
Name
(GenBank) RNA helicase
Organism
actl
Actinoplanes sp. L3-i22
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
DEAD
Helicase_C
MZB
APH
ABC1
MTES_1575
DUF559
DZR_2
Motif
Other DBs
NCBI-ProteinID:
BCY13180
LinkDB
All DBs
Position
complement(9141528..9147761)
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AA seq
2077 aa
AA seq
DB search
MANRFQIINAVGKGNMGEVHRAEDTHAAEDSLDRTVAVKLILRTRSGASIHAHDDPAVQR
FQREIRIMRKLHHPNLTRIIDGGIDDAGLPYLAMEYLNGGTLRDLASEHPQLPLSWVAAL
GAQIADGLFAAHQAGVIHRDLKPANVMVVQGGLVKVLDFGMGRIVDDVETAKLTSTGVTV
GTARYMAPEQFRGSVVTAAADLYALGCVLYELTTGSAPFTSESAHEVGEKHLHQPVPEIG
FSRSGVPEVLGRLIRQLLDKDPTLRPENAADVRDALSGLLASLDAKASVPGWEQLNPVTY
LSAARFEDSSTSTGGELVELAAGRSTGAGMDVFAVHQQLIEDYRSFTEGGTIIRNDRIKA
FVEDDLDRRSQWPEPWLSLNPSFEPGGTMPELVRDGVLHEECARIFQAKKTEGGRVCDGR
PLSLYRHQRQAIDLARTGASYVLTTGTGSGKSLAYIVPIVDRVLRVRAEEAGQHRNRVRA
IVVYPMNALANSQLKELEKYLRDGYGEGNEPVTFARYTGQESDERRKEIRDSPPDILLTN
YVMLELMLTRPDDRRSLIKMAKGLEFLVFDELHTYRGRQGADVALLIRRVREACQAQQLQ
CVGTSATMSSEGTFEAQRRVVAGVASTLFGTDIPADHVVGETLLRATADTPDAVPADRLR
VPGAPRAYADLVVDPLARWIETRFGLDTDLNGRLVRQKPAKVEAAADELAEQSGVTREDC
TGAIRRTLQAGSQARHPKTERPLFAFRLHQFLSKGDTVYVTLEDPMTRHLTRDYQLIQPG
SQGKILLPLAFCRECGQEYLTVWRTEKDAGYVYEPRRDTAASGGRTGDGYLYIDTERNWP
STVEDAIAERRIPESWLETDDSGHEVVRKSYVPRLPTPITVDPYGAEGLGDVRVAFIPSP
FLFCLHCGVSYEQVRGKDFAKLATLDQEGRSSATSVVSASVVRSLRSVPAENLDPRARKL
LTFVDNRQDAALQAGHFNDFVQITQLRSALYRAAVDAGEEGLKHEDLADRVTAAMGLTRA
DFCRNANAAPALLKNADRTFRDVVAFRVYLDLERGWRVTMPNLEQTGLVEIDYADLDWVA
SEQPLWAKRELVLARAEANIRAEIMKALLNEMRRALAIDVQYFRDDFDNLQRATEERLID
PWVLAPTDRPKVGTAYPQPSRPGMDRSGLFLSGRGKFGKYLRRVHYSDLTVDETQAVIID
LLEVLAEAGLLTRVQDAPERSGRFRRPVTTPVTGYRVAAAALVWHAGKGETGTHDPLTRT
YSSGDGPRVNTFFRNLYHDAAGDLSGLIAREHTAQVSPAEREEREEAFRKGELKLLYCSP
TMELGVDISELNAVMMRNVPPTPANYAQRSGRAGRSGQPALVTTYCATGNSHDQYYFRRS
ERMVAGVVAPPRLDLANEDLVQSHVHALWLAEAGLKLGRAIPEIIDVSYAEGARNPNPAL
ALHDHIKAALADQDAERRAVSAAQQVLSGLLPEFRDESSWWDEAWIADRVHQAPVRFNAA
FDRWRDLFKAALIDQAEQNRRVLDHTLQDRDQGIAVGRRREAETQIALLKNDTVESKSVL
SDFNPYRYLASEGFLPGYSFPRLPLAAYVPTSGRRIGEGDYLQRPRFLAIREFGPGALIY
HEGARYQVTRIQLPPDSDGDVTTTQARRCLQCGYHHDVQDHATICEMCNEQLPPPTSGLL
QLHTVYTKRRERISSDEEERRRAGFRLVTSYRFNDHGLRPGRRDAIVSYSDRKLATLSYG
DSATVRITNTGRVRAKPDEPDGFWLDPADGRWMNERDAGEASGDSSEMPVVDAEGNEKRR
KKRVLPYVEDRRNILVVKLAEPLQREVALSLMYALERGIEAAFELEDSELTSELLPPVDS
LRDRMLFTEAAEGGAGVLRQLQSESDALGRAAAEALAICHFDDEGNDLGGEHPDRPCARG
CYECLLTYGNQLDHSAIDRHSVRELLLRIAGAEALDTGRGESRSEQLARLTDQADSSLEE
QFLAWLKARGHRLPDETQHLVGSALARPDFVYLLPGASVAVFVDGPMHKHAAVAERDADA
QERLYDLGWEVVRFPHDGDWTAIVKEHSTYFGHGATI
NT seq
6234 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaccgcttccagatcattaacgcggtcggcaaaggcaacatgggcgaggttcac
cgtgccgaggacacccacgcggctgaggattcgctcgaccggacggtcgcggtcaagctg
atcctgcggacccggtccggggcttccatacatgcgcacgacgacccggcggtccagcgt
ttccaacgcgagatccggatcatgcgcaagctgcaccatcccaatttgacccgcatcatc
gacggcggcatcgacgatgcaggactgccgtatctcgccatggagtacctcaacggcgga
acgctgcgtgacctggcgagtgagcacccgcagctgccgctgagttgggtagccgcgctc
ggcgcgcagatcgcggacggcctcttcgccgcccatcaggccggcgtcatccatcgggac
ctgaagccggccaacgtcatggtggtccagggtggtctcgtcaaggtgctggacttcggg
atggggcggatcgtcgacgacgtcgagaccgcgaagctgacgagcacgggcgtcacggtc
ggcaccgcccgctacatggcgcccgagcagttccgcggctcggtggtgacggctgctgcg
gacctgtacgcactgggctgcgtcctctacgagctcactaccggctccgcgccgttcacc
agtgagtcggcgcacgaagtcggcgagaagcaccttcaccagccggttcccgagatcggg
ttctcacggtccggcgtgccagaggtcctgggccggttgatcaggcaactcctcgacaag
gatccgacgctgcggccggagaacgccgcggatgtccgggacgccctttcgggcctactg
gcttcgcttgacgcgaaggcatctgtcccgggctgggagcagctgaacccagtgacgtat
ctgagcgccgcgcggttcgaggattcctccacaagtacgggcggcgagctcgtggagctg
gccgccggccgatcgactggcgccggcatggacgtcttcgcggtgcaccagcagctcatc
gaggactatcgttcgttcaccgagggcgggactatcatccggaacgaccggatcaaggcg
ttcgttgaagatgacctagatcgccggtcccaatggccggagccgtggctctcactgaac
ccgtcgttcgagcccggcggcactatgccggaattggtccgtgatggagtgctacacgag
gaatgcgcccggatcttccaggctaagaagaccgaaggcggccgagtctgcgacggtcgg
ccgctgtcgctctatcgccaccagcgccaggccatcgacctggcccggaccggagcctcc
tacgtcctgaccaccggcaccggttctggcaaatcactggcttatatcgtgccgatcgtc
gaccgtgtcctgcgggttcgcgcggaggaagctgggcagcatcgcaaccgggttcgggcg
atcgtggtctacccgatgaacgccttggccaacagccagctcaaggagcttgagaagtac
cttcgggatgggtacggcgagggcaatgagccggtcacgttcgcccggtacaccgggcag
gagtccgacgagcggcgcaaggagattcgggatagtccaccggacatcctgctgaccaat
tacgtgatgctggagttgatgctcacccgtcccgatgatcggcgttcgctgatcaagatg
gcaaaaggtctggagttcctcgtcttcgacgagctgcatacgtatcgggggaggcagggc
gccgatgttgctctccttatccgtcgcgtccgggaggcatgccaggcgcagcaactgcag
tgcgtcggaacttcggcaactatgtcgagcgagggcaccttcgaagcacaacgccgcgtc
gtcgctggcgtggcgagcactctcttcggcaccgacatcccagcagaccatgtggtcggc
gagaccctgcttcgagccaccgccgatacaccggatgccgtcccggccgaccgtctgcgc
gtaccgggggcaccgcgggcctatgcggatctagtggtcgatccgttggctcggtggatc
gagacccgcttcggcttggatacagacctcaacggacggctggtcagacaaaagccggcg
aaggtcgaggctgcggccgacgaacttgccgagcagagcggcgtaaccagagaagactgt
actggggcgattcgccgcacgttgcaggccggctcgcaggctcggcatccgaagacggag
cgcccgctgttcgcgtttcggttgcatcagttcctctccaagggcgacacggtttacgtc
acccttgaggatccgatgacccggcatctgacccgggactatcagctgatccaaccgggg
tctcaggggaaaatcctgctgccgctcgccttctgccgcgagtgcggccaggaatacctg
acggtctggcgtacggagaaggacgccggttacgtctacgaaccgcgccgggacacggcc
gccagtggcggccgcaccggcgacggctatctatacatcgacaccgagcgcaactggcca
tccaccgtcgaagacgctatcgccgagcgtcgaattccggaatcctggctggagactgat
gactccggccatgaagttgtccgtaagtcgtatgtccctcggcttccgacgccgatcacg
gtcgacccgtacggcgccgaagggttgggcgatgtccgagtagcgttcattccctctccc
ttcctgttttgtctgcactgcggtgtcagctacgagcaggttcgagggaaggacttcgcc
aagttggccaccctcgaccaggagggccgctcgtccgccacatcggtcgtctccgcatca
gtggtgcgctcactgcgctcggtgccggctgagaatttggatcccagagcgcgcaaacta
ctcacctttgtcgacaaccggcaagatgctgcactacaggctggccatttcaacgacttt
gttcagatcacgcagcttcgcagtgccctctatcgagccgcggtcgatgccggggaagag
ggactcaagcatgaggacctcgccgatcgggtcaccgcggccatgggcctgactcgcgcg
gacttctgccggaatgccaatgcggcacccgccctgctcaaaaatgccgacagaacgttc
cgcgatgtcgtcgcttttcgcgtctacctcgatttggagcgcggctggcgggtgacaatg
ccgaacctggaacagaccggcctagtagagatcgactatgccgacctcgactgggtcgcg
agcgaacagccgttgtgggccaagcgcgagctggtgctcgcccgcgccgaggcgaatatc
cgcgccgagatcatgaaggccctgctgaacgagatgcgccgcgctttggccatcgatgtg
cagtacttccgcgacgacttcgacaatctgcaacgagcgaccgaggaacggctgatcgac
ccctgggtgctggcaccgaccgaccggccgaaggtggggacagcctacccgcagccctcg
cggccaggcatggatcgctcggggctgttcctctccgggcgcggcaagttcggtaagtac
ttgcgccgagtccactactcagatctcaccgtggatgagactcaggccgtcatcatcgat
ctgttggaggtcctggccgaggcaggtttactgaccagggttcaggacgcgccggagagg
tccggacgattccggcggcccgtcacaactccggtaactggctaccgggtagccgccgcg
gccctcgtctggcacgccggcaaaggcgagaccggcacgcatgatccactgacccgcacg
tactccagcggcgacggcccacgcgtcaatacattcttccggaatctttaccacgacgcc
gccggagacctgagcgggttgattgctcgcgaacacactgctcaggtctcaccagcggag
cgcgaagaacgcgaggaagcgttccgcaagggcgagctgaagctgctctactgctccccg
accatggagttgggcgtggacatctccgaactaaacgcagtgatgatgcgcaatgtgccg
ccgaccccggcaaactacgcgcagcgcagcggccgggctggacgatcgggacaaccggca
ctggtcaccacctactgcgctaccggaaacagccacgaccagtattacttccgccggtcc
gagcgaatggtggcgggggtcgtagccccgccgcgcctggacctggccaacgaggacctg
gtgcagtcccacgtgcacgcgctctggctcgccgaagccgggctgaagctgggccgggcg
atccccgagatcatcgatgtcagctacgccgagggcgcccgcaatccgaatccggccctc
gcactgcacgaccacataaaggccgcgctggctgaccaggacgccgaacgacgtgccgtc
tccgccgcccagcaggtgctcagcgggctgctgcctgaattcagggatgaaagttcctgg
tgggacgaggcgtggattgccgaccgtgtgcaccaggctccggtccggttcaatgcggcc
ttcgaccgctggcgcgacttgttcaaggcagccctgatagaccaggccgagcagaatcgc
cgtgtcttggaccataccttgcaggaccgcgaccaggggatcgcagtcggacggcgtcgt
gaggccgagacgcagattgccctattgaaaaatgacacggtggagagcaagtcggtgctg
tccgacttcaatccctaccggtacctagccagtgaaggcttcctgcctggatattcgttc
ccacgtcttcccctcgccgcctacgtgccgacctctgggcgtcggatcggtgagggtgac
tacctgcagcgccctcgcttcctggcaatccgtgaattcggcccgggcgcactgatctac
catgagggcgcgcggtaccaggtcacccggatccagttgccgcctgactccgatggcgac
gtgacgaccacgcaggcgcgtcgttgcctccagtgcggttaccaccatgacgtgcaggat
cacgcgaccatctgcgagatgtgcaatgagcagctccccccgcctacctcgggcctgctt
cagttgcacacggtttacaccaagcgccgcgagcggatctcatccgacgaggaggaacgt
cgccgagcgggcttcaggctggtcacgtcctatcgtttcaacgaccacggactgcgcccc
ggacgccgcgacgccattgtgtcgtattcggaccgaaagctcgcaacgctgtcgtacggc
gactccgccactgtgcggatcaccaataccggccgggttcgcgccaagcccgacgaaccg
gacggtttctggctcgatccggcagacggccgttggatgaacgagcgggacgccggcgag
gcttccggtgactccagcgaaatgccggtggttgacgccgagggcaatgagaagcgacgc
aagaagcgggtgctgccgtacgttgaggaccggcgcaatatccttgtggtcaagctggcc
gaaccgttgcagcgtgaggtagcgctctctctcatgtacgcgctcgagcgcggcatcgag
gccgctttcgaacttgaagactcggagttgaccagcgagttgctgccgcccgtcgatagc
cttcgcgatcggatgctctttaccgaggcagctgaggggggcgccggcgtcctgcgccag
ctgcagtccgagtccgacgcgcttggccgtgccgcggcggaggcccttgccatctgccac
ttcgacgacgagggcaacgacctcggcggtgaacacccggatcggccctgtgcccgtggc
tgctacgagtgccttcttacctacggcaaccagctcgatcactccgccatcgaccggcat
tccgtacgcgagctgttgttgcgcatcgccggcgccgaagcgcttgacaccggccggggc
gagtcccgctcagagcaattagcacggctgaccgaccaggcagactccagcttggaggaa
cagttcctcgcctggctcaaggcacggggccaccggctacccgacgagactcagcacctc
gtcggctcggcgctggcccggccggatttcgtctatctgcttcccggcgcgagcgttgcc
gtgttcgtagacgggccgatgcacaagcacgccgccgttgccgagcgcgatgcagatgct
caggagcgtctctacgacctcggctgggaagtcgtccgcttcccccacgacggcgactgg
acagcgatcgtcaaagaacattcaacctacttcgggcatggcgcgaccatctga
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