Actinoplanes sp. L3-i22: L3i22_088510
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Entry
L3i22_088510 CDS
T08939
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L3i22_088510 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
actl03019
]
L3i22_088510 (recQ)
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_088510 (recQ)
Enzymes [BR:
actl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3i22_088510 (recQ)
Messenger RNA biogenesis [BR:
actl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L3i22_088510 (recQ)
DNA repair and recombination proteins [BR:
actl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L3i22_088510 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3553
DprA_WH
PcrA_UvrD_tudor
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BCY13763
LinkDB
All DBs
Position
9877227..9878894
Genome browser
AA seq
555 aa
AA seq
DB search
MRLPIYGPRLRKVARTHFGWPSLRPGQFKPMRAVLRRKDALVVLPTGAGKSAIYQIPAVL
LPGPTVVISPLLALQQDQIAALNERNDPKIRAVRVSSAETPREQQAAIEELRTGRAEFLF
ITPEQLANPERLAEVKALKPGLVAIDEAHCISAWGPDFRPDFLALGDMIRELGRPPVLAL
TATASPPVREDIINRLQLRKPEIHVSGLDRKNLFLEVAYCPDEAYRWRHLTSMLDEGQRP
GIVYVATRRAAEELAEKLTQAGYSAEYYHGGMAGGLREQRHEDFTDDKVDIMVATSAFGM
GIDKPNIRWVAHMALPDSPDSYFQEIGRAGRDGEPGRVLLLWRAEDEAIQRFFNGGGPDE
DELRELAGALHKGPTTKTALQKDTGLGPRRIAQYLALLEQAGAVRTGKGNKLEVPPGGPL
PVQAAKAAVAEFERQQAVINSRTDMMRAFAESRQCRTETLLAYFGEEIRRNCGHCDNCAD
GSAEEVNAVEEDGPFPVHAQVRHGEWGTGMVMGYEEEKMTVLFDTVGYKTLSVPVVVNQK
LLTAVGKKKAQGRAS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagactcccgatctacggcccccgcctgcgtaaggtggctcgcacccacttcggctgg
ccgtccctgcgtcctggtcagttcaaaccgatgcgcgccgtgctgcgccgcaaggacgcg
ctcgtcgtgctcccgaccggcgccggcaagtcggccatctatcagatcccggcggtgctg
ctgcccggcccgaccgtggtcatctccccgctgctggccctgcaacaggaccagatcgcc
gcgctcaacgagcggaacgacccgaagatccgcgcggtccgggtcagctccgccgagacc
ccgcgcgagcagcaggcggcgatcgaggagctgcgcaccggccgggccgagttcctcttc
atcacccccgagcagctcgccaacccggagcggctggccgaggtcaaggcgctcaagccc
gggctggtcgcgatcgacgaggcgcactgcatctcggcgtggggcccggacttccggccg
gacttcctggcgctcggcgacatgatcagggagctgggccggccgccggtgctggcgctg
accgcgaccgcgtcgccgccggtccgcgaggacatcatcaaccggctgcagctgcgcaag
ccggagatccacgtgtccgggctggaccggaagaacctgttcctcgaggtggcgtactgc
ccggacgaggcgtaccggtggcgccacctgacgtcgatgctcgacgaggggcagcggccc
ggcatcgtctacgtcgcgacccggcgcgccgccgaggagctcgccgagaagctcacccag
gcgggctactccgcggagtactaccacggcgggatggccggcggcctgcgcgagcagcgg
cacgaggacttcaccgacgacaaggtcgacatcatggtggcgacctcggcgttcggcatg
ggcatcgacaagccgaacatccgctgggtcgcgcacatggcgctgcccgactcgccggac
agctacttccaggagatcgggcgggccggccgggacggcgagcccgggcgcgtgctgctg
ctctggcgggccgaggacgaggcgatccagcgcttcttcaacggcggcgggccggacgag
gacgagctgcgggagctggccggcgcccttcacaaggggccgaccacgaagaccgcgctg
cagaaggacactgggctcggcccgcgccgcatcgcgcagtacctggcgctgctggagcag
gccggcgcggtccggacgggcaagggcaacaagctcgaggtcccgcccggcggaccgctg
ccggtccaggccgccaaggccgccgtcgccgagttcgagcggcaacaggccgtgatcaac
tcccggaccgacatgatgcgggccttcgcggagagccggcagtgccgtaccgagacgctg
ctcgcctacttcggcgaggagatccggcggaactgcgggcactgcgacaactgcgccgac
ggcagcgccgaagaggtcaacgcggtcgaggaggacggccccttcccggtccacgcccag
gtccgccacggcgagtggggcaccgggatggtgatgggctacgaggaggagaagatgacc
gtcctcttcgacacggtcggctacaagacgctctcggtgccggtggtggtcaaccagaag
ctgctgaccgcggtcggtaagaagaaggctcagggacgcgcctcgtag
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