Actinoplanes sp. L3-i22: L3i22_095300
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Entry
L3i22_095300 CDS
T08939
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
actl
Actinoplanes sp. L3-i22
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
actl03016
]
L3i22_095300 (truB)
Enzymes [BR:
actl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L3i22_095300 (truB)
Transfer RNA biogenesis [BR:
actl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L3i22_095300 (truB)
Prokaryotic type
L3i22_095300 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BCY14442
LinkDB
All DBs
Position
complement(10681951..10682793)
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AA seq
280 aa
AA seq
DB search
MTSHDVVARIRRLAKTRRVGHGGTLDPMATGVLIIGVNRATRLLTYVIGSGKSYAATIRL
GQSTITDDAEGDVTATASTAAVTDEAIRAGLAVQVGAIDQVPSAVSAIKINGQRAYKLVR
DGETVEIPARRVTVHKIDVRDIRRPDGDVIDVDVDVDCSSGTYIRAIARDLGASLAVGGH
LTALRRTAVGPMTLDTALTLEQLEERAPDVVTLPMAEAARRAFPQRIATEEETRILRHGG
PLDTVGIDGPYAVFDPAGDVLAIVSERDGRARAEIVLSPA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcacgacgtcgtcgcgcggattcggcggctggcgaagacgcggcgggtcggc
catgggggcacgctggacccgatggcgaccggagtgctgatcatcggggtgaatcgggcg
acccgcctgctcacctacgtgatcggctccgggaagagctatgccgccacgatccggctc
ggtcagtcgacgatcaccgacgacgccgagggggacgtgaccgcgaccgcgtccaccgcc
gcggtgaccgacgaggcgatccgggcgggtctggccgtgcaggtcggtgcgatcgatcag
gtgcccagcgcggtcagcgccatcaagatcaacgggcagcgggcctacaagctggtccgg
gacggcgagaccgtggagatcccggcgcgccgggtcaccgtgcacaagatcgacgtgcgg
gacatccggcggccggacggggacgtgatcgacgtcgacgtggacgtcgactgctcctcc
ggcacctacatccgggccatcgcgcgggacctgggcgcgtccctcgcggtcggcggccat
ttgaccgcactgcgacgcaccgccgtcggcccgatgaccctcgacaccgcgctcaccctg
gagcaactcgaggagcgcgcccccgacgtcgtcaccctcccgatggccgaggcggcccgg
cgcgcgttcccgcagcggatcgcgaccgaggaggagacccggatcctgcggcacggtggc
ccgctcgacaccgtcggcatcgacgggccgtacgcggtgttcgacccggccggcgacgtg
ctggcgatcgtcagcgagcgggacgggcgggcccgcgccgaaatcgtgctctcgcccgcc
tga
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