Actinoplanes sp. L3-i22: L3i22_099490
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Entry
L3i22_099490 CDS
T08939
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl03420
Nucleotide excision repair
actl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L3i22_099490
03430 Mismatch repair
L3i22_099490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_099490
Enzymes [BR:
actl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3i22_099490
DNA repair and recombination proteins [BR:
actl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3i22_099490
MMR (mismatch excision repair)
Other MMR factors
L3i22_099490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
BCY14861
LinkDB
All DBs
Position
complement(11133489..11136977)
Genome browser
AA seq
1162 aa
AA seq
DB search
MRADAGPRYTPLELARLLRLPPPTDEQAAIVAHPVKPLLVVAGAGSGKTETMASRVVWLV
ANGYAHPGEILGLTFTRKAAGELSHRVRTRLGQLARRLGGRDDALAGEATISTYHSYAAR
VVTEHGLRGGFEPSARLLTEAARWQIVDSLVRAYTGEMTGLNRAPGTVTDDVLALSAELA
EHLKSPDDLAAWTGRFFAEVQSFPGRMYKDVSEMLRRQQHRLTLLPLVRLYEQRKLDLEA
MDFGDQMARAALVARDHPAVGEVERGRYRVVLLDEYQDTSHAQVTMLNNLFGGGHPVTAV
GDPCQSIYGWRGASAGTLERFPTEFPDAEGRPAWVHSLTRSWRNRPEILQVANVISAPLR
ARVGVLRPAETVAEAVGGRTVTCALLTTYAEEASWIADSMLTAWRITAGMPRALPGEIPL
DRRPTSAVLVRVRSQIPVIEEELRARGLPVEVVGLGGLLDTPEVRDVVCTLRVLADPTDG
ASLLRLLTGARWRIGPRDLVALHRRSRVIAAARVERTEEQDEDLLADRLDDATLIEAMAD
LGARQQYSAEGFTRLAAFSRELGALRLRLDQPLPDLLADIERTAGLDVEVAVRGWAAGDA
GLARAHLDALGEAATRYSSENETGTLAGFLAFLAAAEEEERGLEPGQVDVVEGAVQILTA
HAAKGLEWDVVSVAGLCRGVWPGLVRASDHYLGGIGVLPFPLRGDASGLPGLELDEAVEQ
KDVNAALGAFGRTWREHDEREERRLAYVAMTRPRRLLLCSGYWWGDGVKRPRGPSVFLDE
VRATCAAGAGVVAAWTPEPAPGDTNPSDEVVSIAEWPADPLGLRRPAMAAAADLIRRMIA
APDASAAEAFADLAAADPEIAARAGLAADLAGLAAAHQDQNQDFPVRAEPTPASTRPAGP
APASNRPAGPALDRASVLAAASAADRVATASDPEIARWRKEARLLLAERDERTRRFGPIE
VALPPHLSVSQLVVLRRDPQALARSLRRPLPQRPAPHARRGTAFHVWLEQRFGAARLIDI
DELPGAADADAAADEELAALQEAFLTGEWADRSPVDVEVPFATTVGGVVLRGRMDAVFAD
PEDRFDVIDWKTGRRPTGAEAEAAAVQLSAYRIAWATLAGVPVSRVRAGFHYVREQVTVR
PADLMDVTALATLITEIPEEEL
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgagggctgacgccggtccccggtacaccccgctggagctggcccggctgctgcggttg
ccgccgccgacggacgagcaggcggcgatcgtcgcgcacccggtgaagccgctgctggtg
gtcgccggcgcgggttccggcaagaccgagacgatggcgtcccgggtggtctggctggtc
gcgaacggttacgcgcatccgggcgagatcctcggcctgacgttcacccgcaaggcggcc
ggcgagttgtcgcaccgggtgcggacccggctcggccagctggcccggcggctgggcggg
cgggacgacgcgctggccggcgaggcgaccatctcgacgtatcactcgtacgccgcccgg
gtggtcaccgagcacggcctgcgcggcggtttcgagccgtccgcccggctgctcaccgag
gcggcccgctggcagatcgtcgactcgctggtccgggcgtataccggggagatgaccggg
ctgaaccgcgcgccgggcacggtcaccgacgacgtgctggcgctctccgccgagctcgcc
gagcacctgaagtcgccggatgatctggccgcgtggaccggccgcttcttcgccgaggtg
cagtcgttcccgggccggatgtacaaggacgtgtccgagatgctgcgccgccagcagcac
cggctcaccctgctgcccctggtccgcctctacgagcagcgcaaactcgacctggaggcg
atggacttcggggatcagatggcccgggccgcgctggtcgcccgggatcatccggcggtc
ggggaggtcgagcgcgggcggtaccgggtggtcctgctcgacgagtaccaggacaccagc
cacgcccaggtgacgatgctgaacaacctgttcggcggcggacacccggtgaccgcggtc
ggcgacccgtgccagtcgatctacggctggcggggcgcgtcggccggcaccctggagcgg
ttccccaccgagttcccggacgcggagggccgcccggcctgggtgcacagcctgacccgg
agctggcgcaaccgcccggagatcctgcaggtggcgaacgtgatctcggcgccgctgcgg
gcccgggtgggcgtgctccggccggccgagacggtggccgaggcggtcggcgggcggacc
gtgacgtgcgcgttgctgacgacgtacgcggaagaggcgtcctggatcgcggactcgatg
ctgaccgcctggcggatcaccgccgggatgccgagggcgttgccgggggagatcccgctc
gaccgccggccgaccagcgcggtgctggtccgggtccgcagccagatcccggtgatcgag
gaggagctgcgcgcccgtggcctgccggtcgaggtggtcggcctgggcggcctgctcgac
acgcccgaggtccgggacgtggtgtgcacgctgcgggtgctcgccgatccgaccgacggc
gcgtcgctgctgcggttgctgaccggggcccgctggcggatcggcccgcgggatctggtg
gccctgcaccggcggtcgcgggtgatcgccgcggcccgggtcgagcggaccgaggagcag
gacgaggacctgttggccgaccggctcgacgacgcgaccctgatcgaggcgatggccgac
ctgggcgcccggcagcagtactcggcggagggtttcacccggctcgcggcgttcagccgg
gaactcggcgccctccggctgcgcctggaccagccgcttcccgatctgctcgcggacatc
gagcggaccgccgggctggacgtcgaggtcgcggtccgcggctgggcggccggtgacgcc
ggtctggcccgggcccacctggacgccctcggcgaggccgcgaccaggtattccagcgag
aacgagaccggcacgctggccggcttcctggccttcctggccgccgccgaggaggaggag
cgcgggctcgagccgggtcaggtcgacgtggtcgagggggcggtgcagatcctcaccgcg
cacgccgcgaagggtctggagtgggatgtcgtgtcggtcgccggcctgtgccggggcgtc
tggccggggctggtccgcgcctccgaccactatctcggcggcatcggcgtgctgccgttc
ccgctgcgtggcgacgcgtccgggctgcccgggctggagctggacgaggccgtcgagcag
aaggacgtgaacgcggcgctcggcgcgttcggccgtacctggcgcgagcacgacgagcgg
gaggagcgccgcctggcgtacgtggcgatgacccgcccccgccgcctgctgctctgttcc
ggctactggtggggcgacggcgtcaagcgcccgcgcggtccgtcggtcttcctcgacgag
gtccgcgcgacctgcgcggcgggcgccggcgtggtggccgcctggacgccggagccggcg
ccgggcgacaccaatccgagcgacgaggtggtgtcgatcgccgagtggccggccgatccg
ctgggcctgcgccggcccgcgatggccgcggccgccgacctgatccgccgcatgatcgcc
gcgccggacgcgtccgccgcggaggcgttcgccgacctcgcggcggccgatccggagatc
gcggcgcgcgccggcctggccgccgacctggcgggcctggcggccgcccatcaagatcaa
aaccaggattttcccgtacgggcggagcccacgcccgcgtccacccggcccgccggtccc
gcgcccgcgtccaaccggcccgccggtcccgcgctcgatcgggcgtcggtgctggccgcg
gcgtcggcggcggaccgggtcgccaccgcctcggacccggagatcgcccgctggcgtaag
gaggcgcgcctgctgctcgccgagcgggacgaacgcacccgccggttcggcccgatcgag
gtcgccctgcccccgcacctctcggtctcccagctcgtcgtgctccgccgggacccgcag
gcgctggcccgctcgctgcgccgcccgttgccacagcgtccggctccgcacgcgcgccgg
ggcacggcgttccacgtctggctggagcagcggttcggcgcggcccggctgatcgacatc
gacgagctgcccggggcggcggacgccgacgcggccgccgacgaggaactggccgcgctg
caggaggcgttcctgaccggcgagtgggcggaccgcagcccggtcgacgtcgaggtcccg
ttcgccacgacggtcggcggggtggtgttgcgcggccggatggacgcggtcttcgccgac
cccgaggaccggttcgacgtgatcgactggaagaccggccgccgcccgaccggcgccgag
gcggaggccgccgcggtgcagctctcggcgtaccggatcgcctgggccaccctggccggg
gttccggtcagccgggtccgggccggcttccactatgtccgggagcaggtgaccgtccgc
ccggccgacctgatggacgtgaccgcgctggccaccctgatcaccgagatcccggaggag
gagctctag
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