Actinoplanes sp. L3-i22: L3i22_100210
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Entry
L3i22_100210 CDS
T08939
Name
(GenBank) putative 3-methyladenine DNA glycosylase AlkA
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L3i22_100210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
actl03000
]
L3i22_100210
03400 DNA repair and recombination proteins [BR:
actl03400
]
L3i22_100210
Enzymes [BR:
actl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
L3i22_100210
Transcription factors [BR:
actl03000
]
Prokaryotic type
Helix-turn-helix
AraC family
L3i22_100210
DNA repair and recombination proteins [BR:
actl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L3i22_100210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
BCY14933
LinkDB
All DBs
Position
11203895..11205391
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AA seq
498 aa
AA seq
DB search
MELDFEHCYRAVDSRDQRFDGCFYTAVRTTGIYCRPSCPAVTPKRQNVTFYVSAAAAQRG
GFRACRRCRPDAAPGSPEWDARADTVGRAMRLIGDGIVDREGVTGLASRLGYTERHLNRM
LTAELGAGPLALARAQRAQTARILVETTDLGLAEIAFAAGFGSVRQFNDTMLEVYAQSPS
RLREKRPVARGEAGVINLRLAYRAPLHAAALLEFLGARTLPGVDEVVGTTYRRGLALPHG
TANVSLRPGERWVFAELRLSDVRDLAPAVARCRRLFDLDADPDAVDAMLGADPALADAVR
AEPGVRVPRAVDGFEIAVRAVVGQQVSVSGARTTLGRIVRAAVEGSVGDVDGLDGLDGLG
PSGPAPAPTSTNQLAGFPSAAVVADLPDSAFGMPTARRATIRALATAVADGKLDLEPGAD
RAETTARLLELPGIGPWTAGYVAMRAIGDPDVFLPTDLAARRGAAALGLPHSAKALAEHA
ERWRPWRSYALIRLWRAA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggagctggacttcgaacattgctaccgcgctgtcgacagccgtgaccagcggttcgac
gggtgcttctacaccgcggtccggaccaccgggatctactgccggccgtcctgcccggcc
gtcacaccgaaacggcagaacgtcacgttctacgtcagcgcggccgccgcccagcgcggc
gggttccgcgcctgccgccggtgccggcccgacgcggcgcccggatcgcccgaatgggac
gcccgcgccgacaccgtcggacgggccatgcgcctgatcggcgacggcatcgtcgaccgg
gaaggcgtcaccggactcgcgtcccggctcggctacaccgaacggcacctcaaccggatg
ctgaccgcggaactcggcgccgggccgctcgcactcgcccgggcgcaacgggcccagacc
gcccggatcctcgtcgagacgaccgacctggggctcgcggagatcgcgttcgcggccggg
ttcggcagcgtgcggcagttcaacgacacgatgctcgaggtgtacgcgcagtcgcccagc
cggttgcgggagaaacggcccgtggcccggggcgaggccggggtgatcaacctgcggctg
gcgtatcgggcgcctctgcacgcggcggcactgctggagttcctcggggcgcggacgttg
cccggcgtggacgaggtggtcggaacgacgtaccggcgtggtttggctcttccccatggg
accgcgaatgtctcgttgcggcctggggagcggtgggttttcgcggagctgcggttgagc
gatgtgcgggatctggcgccggcggtggcccggtgccggcggctgttcgatctcgacgct
gatccggacgcggtggacgcgatgctcggggcggatccggcgctggccgatgcggtgcgg
gcggagccgggggtgcgggtgcctcgggcggtggatgggttcgagatcgcggttcgggct
gttgtggggcagcaggtgagtgtttctggggctcggacgacgttggggcggattgttcgg
gcggcggttgagggttcggtgggtgatgttgacggactggacggactggacggactcggc
ccttcgggccccgcccccgcccccacctccaccaaccaacttgccggttttccgtcggcg
gccgtcgtagccgacctgccggactccgccttcggcatgcccacggcacgtcgcgccacc
atccgagccctagccaccgccgtagccgacggcaagctcgacctcgagcccggcgccgac
cgcgccgaaaccaccgcccgcctgctcgagctccccggcatcggcccctggaccgccggt
tacgtggcgatgcgcgccatcggtgacccggacgtcttcctccccaccgatctggccgcc
cgtcgtggcgcggccgcgctgggtcttccgcactcggcgaaggcgctcgccgagcatgcc
gaacgctggcgcccatggcgttcgtacgccctgatccggctgtggcgggcggcctga
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