Actinoplanes sp. L3-i22: L3i22_105570
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Entry
L3i22_105570 CDS
T08939
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
actl
Actinoplanes sp. L3-i22
Pathway
actl00040
Pentose and glucuronate interconversions
actl01100
Metabolic pathways
actl02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
actl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
L3i22_105570
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3i22_105570
Enzymes [BR:
actl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
L3i22_105570
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GFIT
Motif
Pfam:
Pectate_lyase_4
3keto-disac_hyd
Glyco_hydro_59_C
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
BCY15469
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All DBs
Position
11802411..11804093
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AA seq
560 aa
AA seq
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MKSAEEIPGRRKRKLVLAGGMAAIVAGLGTVAGVSFAETGDESTTTAAATGTAAFSDDFE
DGDTAGWTKSGGTWSVVADSTKVLKQAKTGATLARQFAGDTTWTDYTVQAKVSPLAVATG
GYAGIVARATSSTSFYRLALTGGNQVRLESVKSGATTVLDEATVTVSAGTAYTLGLTVSG
STLSGSVNGASVVSGTATASTKGRIGLQTYDATAEFDDVVVTTSGSAAATTAPAATASAT
ATASATATATPTATATATPTATATSSGKFETSPIGFGAGTTGGAGGTTVAITSLSQLITE
AASDGPKILQLSSVLKGSGSDEVVVSSDKTIVGVGANAGLTGAGIFVKKASNVIIRNLKI
SFALAPVDLIAVQKSDHIWIDHNELFNDTSHGKDFYDGMVDLTHATDFVTVSWNYLHDHF
KGSLVGHSDSNAAEDTGHLRITYSHNWFDNVGSRLPRLRFGTVHAYDNLFSNASTSGIHC
LMDAQCLIQNNVFVNVKLPVWTTEDSDKDGFAVISGNDFGGEAPVITQTGTFTTAPYAVT
LEPASAVSALVKAGAGTGKI
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgccgaagagatccccggtcgacgaaagcggaagctcgttctggccggcggc
atggccgcgatcgtggccggcctcggcaccgtggccggcgtctccttcgccgagaccggc
gacgagagcaccaccaccgcggccgccaccggcaccgccgcgttctccgacgacttcgag
gacggcgacaccgccggctggaccaagtcgggcggcacctggtcggtcgtcgccgacagc
accaaggtgctcaagcaggccaagaccggcgcgaccctggcccggcagttcgccggcgac
accacctggaccgactacaccgtgcaggccaaggtctccccgctcgcggtggcgaccggc
ggttacgccgggatcgtcgcccgggcgaccagctcgaccagcttctaccggctcgcgctg
accggcggcaaccaggtccggctggagtcggtgaagtccggcgcgacgaccgtgctcgac
gaggcgaccgtgacggtgagcgccggcacggcctacaccctcgggctcacggtcagcggc
agcacgctgagcggctcggtcaacggcgcctcggtggtgtccggcaccgcgaccgcgtcc
acgaagggccggatcggcctgcagacctacgacgcgaccgccgagttcgacgacgtggtg
gtgaccacgagcgggtccgccgccgccaccaccgcgccggccgcgaccgcttcggccacc
gcgaccgcctcggccaccgcgaccgcgacccccaccgcgaccgccaccgcgaccccgacc
gcgaccgcgaccagcagcggcaagttcgagaccagcccgatcggcttcggcgcgggcacc
accggcggcgccggcggcacgaccgtcgcgatcacctcgctgagccagctgatcaccgag
gccgcctcggacggcccgaagatcctgcagctctccagcgtgctcaagggcagcggctcg
gacgaggttgtcgtctcctcggacaagaccatcgtgggtgtcggcgcgaacgccggcctg
accggcgcgggcatcttcgtcaagaaggccagcaacgtcatcatccgcaacctgaagatc
tcgttcgcgctggcgccggtcgacctgatcgccgtgcagaagtccgaccacatctggatc
gaccacaacgagctgttcaacgacacctcgcacggcaaggacttctacgacggcatggtc
gacctgacccacgccaccgacttcgtcacggtctcctggaactacctgcacgaccacttc
aagggctcgctggtcggccactcggacagcaacgccgccgaggacaccggccacctgcgg
atcacctacagccacaactggttcgacaacgtcggctcgcgcctgccgcgcctgcgcttc
ggcaccgtgcacgcctacgacaacctgttcagcaacgcctccaccagcggcatccactgc
ctgatggacgcgcagtgcctgatccagaacaacgtcttcgtcaacgtcaagctcccggtc
tggacgaccgaggactccgacaaggacggcttcgcggtcatctccggcaacgacttcggc
ggtgaggcgccggtgatcacccagaccggcacgttcaccaccgcgccgtacgcggtcacc
ctggagcccgcttccgcggtctccgccctggtcaaggccggtgcgggcaccggcaagatc
taa
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