Actinomyces sp. zg-332: HCQ94_00720
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Entry
HCQ94_00720 CDS
T08424
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
actm
Actinomyces sp. zg-332
Pathway
actm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
actm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCQ94_00720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actm03021
]
HCQ94_00720
03400 DNA repair and recombination proteins [BR:
actm03400
]
HCQ94_00720
Enzymes [BR:
actm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HCQ94_00720
Transcription machinery [BR:
actm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HCQ94_00720
DNA repair and recombination proteins [BR:
actm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HCQ94_00720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QPK94709
LinkDB
All DBs
Position
171882..172886
Genome browser
AA seq
334 aa
AA seq
DB search
MLIAQRPTLTEEVVSPFRSRFTIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVP
HEFRTIAGVKEDVTEIILNIKELVLSSDNDEPVVMYLRKSGPGEVTAADITLPAGVEVHN
PDLHIATLNSKGKIEIELTVERGRGYVSAQQNKDANAEISRIPIDSIYSPVLKVTYKVEA
TRVEQRTDFDCLIIDVETKPAIKPRDAVASAGKTLVELFGLARELNVDAEGVEIGLAVTD
ASLTAEYAISVQDLGLSSRSLNCLMREGIATVGELVARSEADLMDIRNFGAKSISEIKDK
LASMGMSLKDSPVPSLVPDAVTTSDIQFSNGTPF
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgcttattgcacagcgaccaacattaaccgaggaagttgtttctcctttccgttctcgt
ttcacaattgaaccacttgaaccaggattcggttatactctcggtaactcactgcgtcgt
acgctactttcctctatacctggtgcggcagtaacatccattcgcattgatggtgttcca
cacgaattccgcactattgcaggggtaaaagaagatgtaactgaaattattttgaatatc
aaagaattagttttgtcttcagataatgacgaaccagtagtgatgtacctacgcaaatct
ggtccaggagaagttacagcagctgacattactttgccagctggtgttgaagtacacaat
ccagatttgcatatcgcaacactaaacagcaaaggtaagattgaaatcgaacttactgtt
gaacgtggacgtggatatgtttcagcacaacagaacaaagatgctaatgctgaaatttca
cgtatcccaattgattcaatttattcaccagttctaaaggtgacatataaagttgaagca
acacgtgttgaacagcgtactgacttcgattgtctaattatcgatgttgaaacaaagcca
gctattaagcctcgtgacgctgtagcatcagctggtaagacactagttgaactattcggt
ttggctcgtgaattgaatgttgatgctgaaggtgttgaaattggcttagctgtaacagat
gcgtctttgacagctgaatatgctatttctgttcaggatttgggcttgtcatctcgttct
ttgaactgcttgatgcgtgaaggtattgcaactgttggtgaacttgttgctcgttctgaa
gcagacttgatggatattcgtaacttcggtgcaaaatctattagtgaaattaaggacaag
ttggcttctatgggaatgtcattgaaagatagcccagtaccatctcttgtcccagacgca
gttacaactagtgatattcaattcagtaacggaaccccattctga
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