Actinomyces sp. zg-332: HCQ94_01630
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Entry
HCQ94_01630 CDS
T08424
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
actm
Actinomyces sp. zg-332
Pathway
actm03030
DNA replication
actm03430
Mismatch repair
actm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCQ94_01630 (dnaE)
03430 Mismatch repair
HCQ94_01630 (dnaE)
03440 Homologous recombination
HCQ94_01630 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actm03032
]
HCQ94_01630 (dnaE)
03400 DNA repair and recombination proteins [BR:
actm03400
]
HCQ94_01630 (dnaE)
Enzymes [BR:
actm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCQ94_01630 (dnaE)
DNA replication proteins [BR:
actm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCQ94_01630 (dnaE)
DNA repair and recombination proteins [BR:
actm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCQ94_01630 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QPK94436
LinkDB
All DBs
Position
426607..430152
Genome browser
AA seq
1181 aa
AA seq
DB search
MASNNFTHLHVHTDYSMLDGAAKISALVSEVDRLGQKAVAITDHGYVFGAYELYSECKKR
DIKPIIGIEAYLTPGTSRFDTERQLWGSPEQQKAGDDVSARGAYTHMTLLARNNEGMHNL
FRLASYASLEGQFGKWPRMDRELLQTYSKGLIGSTGCPSGEIQTRIRLGQFDKALEVAGE
LQDMFGKDYFYVEVMNHGIDIEKRVIPSLIDLSQKINAPLIATNDSHYVKKEDYSFQDAL
LCINSGSILSDPNRFKFDGIDYYLKPAEEMRHIWRDFPEACDNTLLVAEQCNVSFYTADE
GANFMPRFPVPPGEDEHSWFVKEVEKGLHARFPNGISEQVRRQTDYEVSVITKMGFPGYF
LVVADFINWAKSKGIRVGPGRGSGAGSMVAYALRITELNPLQHGLIFERFLNPERVSMPD
FDVDFDERRRGEVIEYVTNKYGDDRVAQVITYGKIKAKQALKDSARVLGYPYIMGEKLTK
AMPPAVMGKDIPVSEIYNSEHKRYKEAEEFRKLVDNDQDAKKIFDLSKGIEGLTRQWGVH
ACAVIMSSKPLVDIIPLMKRLQDGAIITQFDYPTCEKLGLLKMDFLGLRNLTVISDALEN
IVHNNKDTVDLDNISLHDDKTFNLLSQGDTLGVFQLEGAGMRSLLRLMRPDNFEDISAVG
ALYRPGPMGADSHTNYALRKNGLQKITPIHPELEEPLKDILGGTYGLIVYQEQVMAIAQK
LAGYSLGQADLLRRAMGKKKKAELDKQYSTFLQGMLDRGYSEAAVTTLWEILLPFSDYAF
NKAHSAAYALVSYWTAYLKANYPVEYMAALLTSQKDNKDKLATYLGECRRMGITVLPPDV
NYSQASFTPVGEDIRFGLGAIRNVGEGIVKDIIATREAEEGFTSFEDFLSKCPGSACSKR
SVESLIKAGAFDSLGYTRRALYAIFEEAVDAALVLKKNEAVGQFDLFAAFDVSDSSLGLS
IPDIPEWSKKEKLDYERHMLGLYVSDHPLNGLEPLLNANRDVSLIDFLEDSDKYRDNMIV
KVCGLVTSMQKKTTKQGNLWTIVTLEDLVASINVLFFPQTYQTVSTILEENILISVTGRL
KKNEDDSFSIYATEMTLLDANTQISDLPFYVNVSESLCTQENILALKETLSHYPGDTPVK
LRVRTQDNEVILALGKEYSVNSSSSLIADLKQIFGYSCIQI
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaataattttacacatcttcacgttcatactgactattctatgcttgatggc
gctgctaaaattagtgcgttagtttcagaagttgatcgcctaggacaaaaagcagttgca
atcactgaccacggttatgtatttggtgcttatgaactttattcagagtgtaaaaaacgt
gatattaagccaataattggtatagaagcttatttgacccctggtacttctcgttttgat
actgaaagacagctatggggcagcccagaacagcaaaaagctggagatgacgtttcagct
cgtggagcttatacgcatatgaccttattagctcgaaataatgagggtatgcacaatctt
ttccgtctagcttcgtacgcctctttggaaggacaatttggtaaatggcctcgtatggat
agggaattactacaaacctattcaaaaggattaattggttctactggatgtccgtcggga
gaaatacaaacacgtatcagattgggacaatttgacaaagcacttgaagttgctggggaa
cttcaagatatgttcggtaaagactacttctacgtggaagtaatgaaccacggtattgat
attgaaaaaagagtaattccgagcctaattgacttgtctcaaaagattaacgctccttta
attgctactaatgactcgcactacgttaaaaaggaagattattctttccaagacgcactt
ttatgtataaactctggttctattctttctgaccctaatcgttttaaatttgatggtatt
gactactatctgaagcctgctgaagaaatgcgtcatatttggcgtgatttccctgaagct
tgtgataatactttgcttgttgcagagcaatgtaatgtttctttttatactgctgacgag
ggtgctaactttatgcctcgtttcccagtgccgcctggcgaagatgaacattcttggttc
gttaaagaggtagaaaaaggattacatgctcgtttccctaacggaataagtgaacaagtt
cgtcgtcaaactgactacgaagtttcagttataacaaaaatgggctttccagggtatttt
ttggtcgttgctgactttattaactgggcaaagtctaaagggatacgagttggtccggga
cgtggttctggtgctgggtcgatggttgcttatgctctacgcattactgagctgaatcct
ttgcaacacggtttgattttcgagcgtttcctaaatcctgagcgtgtgtctatgcctgac
tttgacgttgattttgacgaacgtcgtcgtggggaagtcatagagtatgtgacgaataaa
tatggtgatgaccgtgttgctcaggttattacttatggcaagataaaagcaaaacaggct
ttgaaagactctgctagagttcttggttatccttacattatgggtgaaaagcttacaaaa
gctatgccaccagcagttatgggtaaagatatacctgtatctgaaatatataactctgag
cataaacgatataaggaagctgaagaattcaggaaacttgtcgataatgatcaagatgct
aagaaaatttttgacttatctaaaggtatagagggacttactaggcagtggggtgtacat
gcttgcgccgtaatcatgagttccaaacctttggttgacattattcctttgatgaagcgt
ctacaagatggtgctataatcacgcagtttgactatcctacttgtgaaaaactcggtctg
ctgaagatggattttttgggtttgcgtaacttgactgtcatatctgatgctttggaaaat
atcgttcataacaataaggatactgttgatttagataatatttctttgcatgatgataaa
accttcaatttgttatcgcaaggggatactttgggggtattccagctagaaggtgctggt
atgcgttctttgttacgtttgatgcgtccagataatttcgaagatatttcagctgtgggt
gctttataccgtccaggacctatgggtgctgactcacacacgaattatgctttgcgtaag
aatggattacagaaaataactcctattcatcctgagcttgaagaacctcttaaagatatt
ctgggtggaacttatggtttgatcgtctatcaagaacaagttatggcgattgctcagaaa
ctagcgggttactctctaggtcaagcagatttgctgcgtagagctatgggtaagaaaaag
aaagctgagctagataaacagtacagtactttcttacaaggtatgcttgatagaggatat
agtgaagcagcagttacgactttgtgggaaatattattgccgttctctgactatgcgttc
aataaggcgcattcagctgcttatgctttagtatcttattggacagcttatctgaaagct
aattaccctgtggaatatatggcagctttgcttacatctcaaaaggataataaggataag
ttagctacttatttgggtgaatgtcgccgtatggggattactgttttacctcctgatgtc
aattactctcaagcatcgtttacacctgtaggtgaagacattcgttttggtcttggtgct
atacgtaatgtgggcgaaggaattgtgaaagacatcattgctactcgtgaagcagaagaa
ggctttacctcttttgaagatttcttgtctaaatgtccaggtagtgcgtgttctaagcga
agtgttgaatcactcattaaagctggggcttttgattcacttggttatacacgtcgtgct
ttatatgcaatttttgaagaggcagtagatgctgcattagtgcttaaaaagaatgaagca
gttgggcagtttgatttatttgctgcttttgatgtttctgactccagtttagggttatcc
ataccagatataccggaatggtctaaaaaggaaaaactagactacgaaagacatatgcta
gggctttatgtttcagatcatcctttgaatggattggaaccgcttttgaacgctaaccgt
gatgtttctttaattgatttcttagaagactcagataaatatagagataacatgatcgtt
aaagtttgcggtttagttacttctatgcaaaaaaagactacaaaacagggtaatttgtgg
acgattgtaactttagaagatttagttgcttctataaatgtgctgtttttccctcaaacc
tatcagacagtttctactatattggaagaaaacatacttatatcagttactgggcgtcta
aagaaaaatgaagatgattctttttctatttatgctactgagatgactctgctagatgcg
aacacacagattagtgacttacctttttatgtaaatgtatcagaatctttatgtacacaa
gaaaatattctagctttgaaagaaacactttcgcattatcctggtgacacacctgtgaag
ttacgagtgcgaacacaagataatgaagttatattagcgctaggcaaggaatatagtgtt
aatagctcatctagtttgattgcagatttgaaacaaatatttgggtatagctgtatacaa
atatga
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