Actinomyces sp. zg-332: HCQ94_02525
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Entry
HCQ94_02525 CDS
T08424
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
actm
Actinomyces sp. zg-332
Pathway
actm03420
Nucleotide excision repair
actm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
actm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HCQ94_02525
03430 Mismatch repair
HCQ94_02525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actm03400
]
HCQ94_02525
Enzymes [BR:
actm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HCQ94_02525
DNA repair and recombination proteins [BR:
actm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HCQ94_02525
MMR (mismatch excision repair)
Other MMR factors
HCQ94_02525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
PFU
SPT2_N
DUF5452
Motif
Other DBs
NCBI-ProteinID:
QPK94591
LinkDB
All DBs
Position
630401..632422
Genome browser
AA seq
673 aa
AA seq
DB search
MNLEQNLLDDLDDRQREVATTFPGPICVMAGAGTGKTRAITYRIAYAVQQGFYRAENVLA
LTFTNKAAFEMQERLAKLGITKVQARTFHAAALRQLTHFWAEEMGYDLPRILENKANIMT
IVANNLSLKLDGAAIRDLSAEIEWAKVSIIPSSEYAQTVTELGRTIPYVKTAQEMQSIFE
MYEKVKTNMGVIDFEDVLILLIGLFKTYPYILQEVHKQYRYFIVDEFQDVSLLQQTLLDL
WVKNPSNLCVVGDTAQTIYSFAGADPSFLVNFSTKYENTKKIVLDKNYRSGKQIIALANS
VIAEAKYKKNKLPSVMLYPNKESDNFVEYNTYFDEANEAENTVAQIRQLLAKNINPSSIA
ILYRTNAQSQYFENYLSDSEIPYIIKNGTKFFSRPEIREAIKMMKKVVLVTPKEQATVVI
DNVLSMLGWRVDSTNLTGSSKEKWDNLNVLRNLAIKEKNIYVHIEQFYNYLVTRMQSQTE
LEKEGVVLSSLHSCKGLEWDYVFLVGMQEGIMPISLAKTDDQIEEERRLLYVGITRAREK
LYISNYLSRQKSIRNTNSASDKNITRFLLKHWNEELSKTTTFKKEKRLEKDSGVLGEYGE
STQYIYKLLSDWRDYISQEESIPKDKIIKESALIAIAVAKPKTIKHLEIIRGVTKTFIYN
HGSEILRLIRDNT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagaacaaaatttactggacgatttagacgataggcaaagagaagttgccact
acttttccaggtcctatttgtgttatggctggtgcaggtactggcaaaactcgtgctatt
acttatcgtatagcttatgctgtgcaacaaggcttttatcgtgctgaaaatgttctggct
cttactttcactaataaagcagcatttgaaatgcaagaaagacttgcaaagcttggaatt
accaaagttcaggctaggacttttcatgctgcagcacttaggcaactgacccacttttgg
gctgaagaaatggggtatgacttacctcgaatacttgaaaataaagctaatataatgacc
attgttgcgaataatttgagcttaaaactagatggtgcagcgataagggatttgagtgca
gaaattgaatgggcaaaagtttctattattcctagcagcgagtatgcacaaacggttaca
gaactaggacggacaattccttatgtgaaaactgctcaagaaatgcaatctatatttgaa
atgtacgaaaaagtaaaaacaaatatgggagtcatagattttgaggatgttttaatactg
ttaattggattatttaaaacttatccttatatattgcaagaagttcataaacaatatagg
tattttatagttgacgagttccaagatgtgtctttacttcaacaaactttactagattta
tgggttaaaaacccgtcaaatttgtgtgtagtgggagacactgctcaaactatttattct
tttgcaggggctgatccatcatttttggtaaatttctcaacaaaatatgagaatactaaa
aaaatagttttggataaaaattatcgcagtggtaagcaaataattgctttagctaactca
gtgattgctgaagcaaagtataagaagaataaattgccaagtgttatgttatatccgaat
aaagaatcagataattttgtagaatataatacttactttgatgaggctaatgaggctgaa
aatacagtagcacaaattagacaactgctagccaaaaacatcaatccgagttctattgct
attctttacaggactaatgcacaatcacagtattttgaaaactatttatctgacagtgaa
attccttatatcataaaaaatggcacaaaattttttagcagacctgaaatacgtgaagct
ataaaaatgatgaaaaaagttgtattagttactcctaaagaacaagcaacagtagttatt
gataatgtattatctatgttgggatggcgcgttgactctactaatctgacaggttcttca
aaagaaaaatgggataatcttaacgttttacgtaacttagctatcaaagagaaaaatatt
tatgttcatatagaacagttttataactatttagtaaccagaatgcaatcacaaactgaa
ttagaaaaagaaggagtagttctttcttctttgcattcatgtaaaggactagagtgggat
tatgtttttctagttggtatgcaagaaggaataatgcctatatcactagctaaaacagat
gatcaaattgaagaagaacgcaggttattatatgtgggaattactagagctagagaaaag
ctatatataagcaattatttatctaggcaaaaaagtatcagaaatactaactctgcatct
gataagaatattacgagatttttacttaaacactggaatgaggaactatccaaaacaact
acttttaaaaaagaaaaacgcttagaaaaagatagtggtgttttaggagaatacggagaa
agtacccaatatatatacaaattattatctgattggcgtgattatatttctcaagaagaa
agtattcctaaggataaaattattaaagaaagtgcacttatagctatagctgttgctaag
cctaagactataaagcacctagagattataagaggagttacaaaaacttttatatataat
catggaagtgagattctaagattaattagagacaatacataa
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