Tongtianella jiawelpingae: HCQ94_02690
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Entry
HCQ94_02690 CDS
T08424
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
actm
Tongtianella jiawelpingae
Pathway
actm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
actm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HCQ94_02690 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actm03400
]
HCQ94_02690 (uvrA)
DNA repair and recombination proteins [BR:
actm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HCQ94_02690 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HCQ94_02690 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_21
nSTAND1
AAA_16
AAA_25
AAA_23
AAA_22
DnaJ_CXXCXGXG
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
QPK94624
LinkDB
All DBs
Position
666683..669517
Genome browser
AA seq
944 aa
AA seq
DB search
MREELIVKGAREHNLKSVDISLPREKFIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSKNPRSTVGTITEIYDYLRLLYARAGSAY
CPICDEEVVEQTTQQIVDKVLEHPLGTKLQVLAPVIRGRKGEYIELFSQLLTQGFSRVMV
DGHQYKLDSVPPLEKKVKHNIEVIVDRIVLKDNSKTRLTDSVESSLKLADGRVIIDYIQG
ETSTQTRFSIHRACPNEHELTLDEIEPRTFSFNAPQGACSTCLGIGTYLEVDPELILGER
TLTLRENVIGIWAGNADYFHKQLASLGIEHGFDIDTPWNELSKEAKEIILYGKDYKVEVE
YRNRWGRLRQYTSGFEGAVQYLKRKYAETESDIMRQKYEAYMREIPCKGCNGARLKKEVL
SVKIGGLNIAQFCDLPISEAKEFLDNLSLDSKRAIIAKSVLVEILARLKFLVDVGLTYLT
LSRSAKTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQKDNQKLIEALVGLKNLGN
TLIVVEHDEDTMKAADWIVDIGPGAGEYGGNIIHSGTYEELLKNTDSITADYLSGRKEIA
IPSKRRKVDIANSVTVEGAKENNLKNVKATIPLGVFTAVTGVSGSGKSTLINGILYQALV
KKLHGARTVPGAHKKVTGIENLDKVVHVDQSPIGRTPRSNPATYTGVWDNIRKLFAQTPE
AKMRGYGPGRFSFNVAGGRCEACKGDGTLKIEMNFLPDVYVPCEQCHGARYNRETLEIRY
KGKNVADVLDMPISAAVEFFEHIPSIARHLRTLTDVGLGYIRLGQSAPTLSGGEAQRVKL
ASELQKRSNGRTIYVLDEPTTGLHIEDINKLLVVLNGLVDKGNTVVVIEHNLDVIKCADW
IIDMGPEGGSQGGKIVASGAPEKVAKTKGSYTGMFLKDILAKKK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagagaagaacttatagtaaaaggtgctagagagcacaatctaaaaagtgtagacatt
agtttacctagagaaaaatttattgtatttactggattatcaggttcaggtaaatcgtca
ctagcatttgacacaatatttgctgaaggacagagaagatacgttgaatctttgtcttct
tatgcacgtcaatttttagggcaaatggataaacctgacgtggattttattgaaggtcta
tctcctgcagtatccattgatcagaaatctacttctaaaaaccctaggtcaactgtagga
actataacagaaatatatgactatttacgtttactatatgctcgcgcaggtagcgcgtat
tgtcctatatgtgatgaagaagttgttgaacagacaactcagcaaattgttgacaaagta
ctagaacatccacttggcacaaaacttcaagttttagctccagttattcgtggacgcaaa
ggggagtacatcgagctgttttctcagttacttacacaaggattttcacgtgtaatggtt
gatggacaccaatataagctggatagtgttccgcctttagagaaaaaagtcaaacataac
attgaagtaattgttgacagaatagttctaaaagataactccaagactcgtctgactgat
tcagtcgaaagctctttaaaacttgctgatggtagagtaataatagattacattcaaggt
gagacaagcactcaaactcgtttttctatacatagagcatgtccaaatgagcatgaacta
actctagatgaaatagagccaaggacgttttctttcaatgctccacaaggtgcttgctct
acttgtttgggaataggaacttatttagaagttgaccctgagttaatactgggtgagaga
actttgactttgcgtgaaaatgtaattggaatatgggcaggaaatgctgattatttccac
aaacaactagcctctttaggaatagaacatggcttcgatattgacacgccatggaatgag
ctttcaaaagaagctaaagaaattattttgtatggaaaagactataaagtagaagttgaa
tacagaaatagatggggtagactacgtcaatatacttcaggttttgaaggagctgtacag
tatttaaaacgtaagtatgccgaaactgaatctgacataatgcgtcaaaaatatgaagca
tatatgcgtgaaattccttgtaaaggctgtaacggtgcaagactgaaaaaagaagtttta
tctgtaaaaattggtggactaaatatcgcacaattctgtgatctgccgattagtgaagct
aaagaatttttagataatctaagcttggattcaaagagagccattatagctaaaagtgtg
cttgttgaaatattggcacgcttaaaattcttagtagatgttggtttgacgtatttaact
ctgtcacgttcagctaaaaccctctcaggtggagaagcacaacgcatccgcttagctaca
caaataggttcagggcttgtgggagttttatatgtactagacgagccttcaattggtcta
catcaaaaagataaccaaaaacttattgaagcattagttgggttaaaaaatcttggtaat
acacttattgtggttgaacatgatgaagacacaatgaaagcagctgattggattgtagat
ataggtccaggtgctggagaatatggcggtaatataattcacagcggtacttacgaagag
ctgctcaaaaatacagactcaattactgctgactacttatcaggacgtaaagaaatcgct
attccatctaagcgtagaaaagttgatattgctaactcggttactgtagaaggtgccaaa
gaaaataacttaaagaatgttaaagcaactattcctcttggagtattcactgctgtaaca
ggggttagcggatcaggtaaatcaactttaataaacggtattttatatcaagctctggtg
aaaaagttgcatggtgctagaacagtgcctggagctcataaaaaagttactggtatagaa
aatctggataaagttgtgcacgttgatcaatctccaattggacgtaccccacgatctaac
ccagcaacttatacaggtgtttgggataatattcgtaagctatttgcacaaactccagaa
gcaaaaatgagagggtatggaccaggtcgtttttctttcaacgttgctggtggacgctgt
gaggcatgtaagggcgacggaactctaaaaattgaaatgaactttttacctgatgtatat
gtgccatgtgaacaatgtcatggagctagatacaatagggaaaccttagaaataaggtac
aaaggaaaaaatgtagctgatgttttagatatgcctatcagcgcagctgtagaatttttt
gaacacatccctagtattgctcgtcacctaaggacacttacagatgtaggtctgggatac
ataagattagggcaaagtgcaccaactctatcaggtggtgaggcacaaagagtaaagctt
gcctctgagctacaaaaacgctctaatggtagaacaatttacgtactagacgaacctact
actggtctacacattgaagatatcaacaaacttttagttgtattgaatgggctggttgat
aagggcaatactgtggtagtaattgaacataacctagatgttattaagtgtgctgactgg
ataatagatatgggaccagaaggtggaagccaaggaggtaagattgtcgctagcggagca
ccagagaaagtcgccaaaactaaagggtcatatactggaatgttcttgaaagatatttta
gctaagaaaaaataa
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