Actinoplanes sp. N902-109: L083_0277
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Entry
L083_0277 CDS
T02655
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L083_0277 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actn03021
]
L083_0277 (rho)
03019 Messenger RNA biogenesis [BR:
actn03019
]
L083_0277 (rho)
Transcription machinery [BR:
actn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
L083_0277 (rho)
Messenger RNA biogenesis [BR:
actn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L083_0277 (rho)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
Spore_III_AA
Ntox28
nSTAND_NTPase5
ATPase_2
AAA_19
AAA_22
VWA_2
AAA
Motif
Other DBs
NCBI-ProteinID:
AGL13787
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All DBs
Position
304663..305745
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AA seq
360 aa
AA seq
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MTDISHLLDIVDDRAWLRADGYLPGPDDIPVSLAQVRQLGLRRGDLVTGTAELNGRKPAG
LHVDKPGRRPDFYQLTALYPQERLRLETTPDVLTTRVIDLVMPIGKGQRALIVAPPMAGK
TTVLKQVANAITTNNPEAHLMVLLIDERPEEVTDMRRSTRGEVIAATFDRTPHDHTALAE
LAIERAKRLVELGRDVVVLLDSITRLGRAYNLCAPGRGRTLSGGLDVSALHPPKRFLGAA
RNIEHGGSLTIIATALVETGSALDTVIFEEFKSTGNAELKLDRQLAEARLFPAVDLAASG
TRRDETILAPGELAAAAQIRRALTGQDRRESLHHLLAQLRTTGSNREFLQRVARSLAIAG
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgacggacatttctcatctgctggacatcgtggatgaccgtgcctggctgcgcgccgac
ggttatctgcccgggccggacgacatcccggtctccctcgcccaggtgcggcagctcggg
ctgcgccgcggcgatctggtcaccggaacggccgagctcaacggtcgtaaacccgccggc
ctgcacgtcgacaagcccggcaggcgccccgacttctatcagctcaccgcgctctacccg
caggagcggctgcgcctggagaccacgccggacgtactgaccacccgggtgatcgacctg
gtcatgccgatcggcaaggggcagcgggcgctgatcgtggcgcccccgatggccggcaag
accaccgtgctcaagcaggtggccaacgccatcaccacgaacaaccccgaggcgcacctc
atggtcctgctcatcgacgagcggcccgaggaggtcaccgacatgcgccggtcgacccgc
ggtgaggtcatcgccgccaccttcgaccgcacgccgcacgaccacaccgcgctcgccgag
ctggccatcgagcgcgccaagcgcctggtcgagctgggccgggacgtcgtggtgctgctc
gactcgatcacccggctcggccgggcctacaacctgtgcgcaccgggccggggccgcacg
ctcagcggcggtctggacgtctcggccctgcacccgccgaagcgtttcctcggtgcggcc
cgcaacatcgagcacggcggctcgctgaccatcatcgccacggcgctggtggagaccggg
tccgcgctcgacacggtgatcttcgaggagttcaagagcaccggcaacgccgagctcaag
ctcgaccggcagctcgccgaggcgcgcctcttcccggccgtcgacctggccgcctcgggc
acccgccgggacgagacgatccttgcgccgggcgagctcgccgccgccgcccagatccgg
cgtgcgctgaccgggcaggaccgccgggaaagcctgcaccacctgctcgcacagctgcgt
acgaccggctccaaccgggagttcctgcagcgtgtggcacgctcgctggccatcgccggc
tag
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