KEGG   Actinoplanes sp. N902-109: L083_0698
Entry
L083_0698         CDS       T02655                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
actn  Actinoplanes sp. N902-109
Brite
KEGG Orthology (KO) [BR:actn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:actn03021]
    L083_0698
Transcription machinery [BR:actn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L083_0698
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_Crp_2 HTH_10 HTH_23 MarR HTH_31 DUF134 DUF7343 NirdL-like_HTH HTH_3 HTH_24 GerE HTH_AraC MarR_2 Sigma70_ECF HTH_Tnp_4 HTH_37 DinB_2 Phage_antitermQ
Other DBs
NCBI-ProteinID: AGL14208
UniProt: R4L6H4
LinkDB
Position
complement(771824..772621)
AA seq 265 aa
MTVVESTPTTTLSQAPADSAADLLNAMAAMPVGHPSRAALRDRAIEAWLPLARHLAHRYS
GRGEPTDDLIQTATVGLIKAVDKFDPERGVDFAGYAIPTVIGEIKRHFRDRTWSVRVPRR
LQELRLAITEANATLTHNLGRSPTVADIAVHLGVTEEEVLEGLEGARAYNATSLSTPISA
DGTTELGDTLGGEDHEYELAETRVALGPALASLDEREQKILTLRFYGNLTQSQIAEQVGI
SQMHVSRLLTKALTKLRGQLSADTI
NT seq 798 nt   +upstreamnt  +downstreamnt
atgaccgttgtggagtcgactccgacgaccacgctcagccaagcgcctgccgacagcgcc
gctgacctgctcaacgcgatggccgccatgccggtcggacacccgtcgcgggcggccctg
cgggaccgcgcgatcgaggcctggctgccgctggcccgccacctcgcgcaccgttactcc
ggtcgcggtgagcccaccgacgacctgatccagaccgccaccgtcggcctgatcaaggcc
gtcgacaagttcgaccccgagcgcggcgtcgacttcgccggctacgccatccccaccgtc
atcggtgagatcaagcgacacttccgcgaccgcacctggtccgtccgggtcccgcgccgc
ctgcaggaactacgcctggccatcaccgaggccaacgccaccctcacccacaacctgggc
cgctcgcccacggtcgccgacatcgccgtgcacctgggcgtcaccgaggaagaggtgctg
gaaggcctggaaggcgcccgcgcctacaacgccaccagcctgtccaccccgatcagcgcc
gacggcaccaccgaactgggcgacaccctcggcggcgaggaccacgagtacgaactcgcc
gagacccgggtggccctgggccccgcgctggccagcctggacgagcgcgagcagaagatc
ctcacgctgcgcttctacggcaacctgacccagtcgcagatcgccgagcaggtcggcatc
tcccagatgcacgtgtcccggctgctcaccaaggcgctgaccaagctgcgcggtcagctg
tcggccgacaccatctga

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