Actinoplanes sp. N902-109: L083_0916
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Entry
L083_0916 CDS
T02655
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L083_0916 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actn03021
]
L083_0916 (rpoC)
03400 DNA repair and recombination proteins [BR:
actn03400
]
L083_0916 (rpoC)
Enzymes [BR:
actn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L083_0916 (rpoC)
Transcription machinery [BR:
actn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L083_0916 (rpoC)
DNA repair and recombination proteins [BR:
actn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L083_0916 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AGL14426
UniProt:
R4LAY6
LinkDB
All DBs
Position
1005461..1009351
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRQWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAASVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVVTSVDADARHRDMSTIENEIFAEKRQSENGRDSEIEKRAAKLEQD
LAELEAEGAKADVRRKVKEAGEREMRQIRDKAQREIDRLDEVLDTFRKLDSKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALLENMDLDAEAENLREIIRTGKGQRKIRALKRLKVVA
AFLNTRNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPRLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVISEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMVIGLYHLTHLTPGAKGEGR
VFSSDAEARMAFDNGELHLQAPVKIRLRDVVGVDNGVKQTPWTAPEEWTEGEPLLVETTL
GRVIFNETLPPGYRFVNFEIRKGQLSAIVNDLAERFPKVALAATLDALKEAGFHWATWSG
VTIGMGDVVGPPRKPEILARYQGEADRIDKQYQRGLMTAEERRGELIDIWTKATTEISKE
METALPQENPLWVMINSGARGNLLQLRQIAAIRGLVANPKGEIIPRPITSSYREGLTVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTDRAIPMTVADKLDDG
TLVVHTHAETGVHARTIADDITDPDGNLVVSRGEDLNSILVDKLVAAGVEHVRVRSVLTC
ESKLGVCAACYGRSLPTGKSVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGEDITQG
LPRVQEIFEARVPKGKAPIADTPGRIRIEDGERSRKIIVIPDDGSDEIVYDKISKRVKLR
AHDGDHVNVGEKLTEGTIDPHELLRIMGPRAVQVHLTSEVQEVYRSQGVLIHDKHIEIII
RQMLKRVTVIDSGAAEFLPGVLVDRALFESENRRIVGEGGEPAAGRPVLMGITKASLATD
SWLSAASFQETTRVLTDAAINSRSDSLVGLKENVIIGKLIPAGTGISKYRNIRVEPTEEA
KAKVYSMTGYPETDYGFGPASGQAVPLDDFDFGSYR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagttgcgcatcggcctggccaccgctgacgacatc
cggcagtggtcgcacggcgaggtcaagaagcccgagacgatcaactaccgcaccctcaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggcaagtacaagcgggtccggttcaagggcatcatctgtgagcgctgtggcgtc
gaggtgacccggtccaaggtccgtcgtgagcgcatgggtcacatcgagctggccgcctcg
gtcacgcacatctggtacttcaagggtgtgccgagccggctgggctacctgctcgacctg
gcgcccaaggacctcgagaagatcatctacttcgcctcgtacgtggtcacgagcgtggac
gccgacgcgcgtcaccgcgacatgtccaccatcgagaacgagatcttcgccgagaagcgt
cagtcggagaacggccgcgactcggagatcgagaagcgtgccgccaagctggagcaggac
ctcgcggagctcgaggccgaaggggccaaggcggacgtgcgccgcaaggtcaaggaggcc
ggcgagcgcgagatgcgccagatccgcgacaaggcgcagcgtgagatcgaccgcctcgac
gaggtgctcgacaccttccgcaagctcgacagcaagcagctggtcaccgacgagctgctc
tatcgcgagctgcgggaccgcttcggtgagtacttcaccggtggcatgggcgccgaggcg
atcaaggcgctgctcgagaacatggacctggacgccgaggccgagaacctgcgcgagatc
atccgcacgggcaagggccagcgcaagatccgtgcgctcaagcggctcaaggtcgttgcc
gcgttcctgaacacgcgcaactcgccgctcggcatggtgctggactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggtggccgcttcgccacgtccgacctg
aacgacctgtaccgccgggtgatcaaccgcaacaaccggctcaagcgcctgatcgacctg
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggccggccggtcaccggcccgggtaaccgcccgctcaag
tcgctgtccgacatgctcaagggcaagcagggccggttccggcagaacctgctgggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcggctcaagctgcaccag
tgcggtctgcccaagcagatggcgctcgagctgttcaagccgttcgtgatgaagcgtctg
gtggacctcaaccacgcgcagaacatcaagtcggccaagcggatggtcgagcggcagcgc
ccggtcgtgtgggacgtcctcgaagaggtcatcagcgagcacccggtgctgctgaaccgc
gcgccgaccctgcaccgtctgggcatccaggccttcgagccgcagctggtcgagggcaag
gcgatccagatccacccgctcgtctgcacggcgttcaacgccgacttcgacggtgaccag
atggcggtgcacgtgccgctgtcggccgaggcgcaggccgaggcccggatcctgatgctc
tcgtcgaacaacatcctcaagccggccgacggcaagccggtcaccatgccgacccaggac
atggtcatcgggctgtaccacctgacccacctgacgcctggcgcgaagggtgagggccgg
gtgttcagctccgacgccgaggcgcggatggcgttcgacaacggcgagctgcacctgcag
gcgccggtcaagatccggctgcgggacgtcgtcggggtggacaacggcgtcaagcagacg
ccgtggaccgctcccgaggagtggaccgagggcgagccgctgctcgtcgagaccacgctg
ggccgggtcatcttcaacgagacgctgcccccgggctaccgcttcgtgaacttcgagatc
cgcaagggccagctgtcggcgatcgtcaacgacctcgccgagcgcttccccaaggtcgcc
ctggccgcgaccctggacgcgctcaaggaggccggcttccactgggccacctggtccggt
gtgacgatcggcatgggcgacgtcgtcggcccgccgcgcaagccggagatcctcgcccgc
taccagggtgaggccgaccggatcgacaagcagtaccagcgtggtctgatgaccgccgag
gagcgtcgcggcgagctcatcgacatctggaccaaggcgacgacggagatctccaaggag
atggagacagcgctgccgcaggagaacccgctctgggtgatgatcaactccggcgctcgc
ggtaacctgctccagctccggcagatcgccgcgatccgtggtctggtggccaaccccaag
ggcgagatcatcccgcgcccgatcacctcgtcctaccgcgagggcctgaccgtgctggag
tacttcatctccacgcacggtgcccgtaagggtctggccgacaccgcgctgcggaccgcc
gactcgggttacctgacccgtcgtctggtggacgtgtcgcaggacgtgatcatccgcgag
gaggactgcggcaccgaccgggcgatcccgatgacggtcgcggacaagctggacgacggc
accctggtcgtgcacacgcacgccgagaccggcgtgcacgcccgcacgatcgcggacgac
atcaccgaccccgacggcaacctggtggtcagccgcggcgaggacctcaactcgatcctg
gtcgacaagctcgtcgccgccggggtggagcacgtccgggtgcgcagcgtcctgacctgc
gagtcgaagctcggtgtgtgtgcggcctgctacggccgttcgctgccgaccggcaagtcg
gtcgacatcggcgaggcggtcggcatcatcgccgcccagtccatcggtgagccgggcacg
cagctgacgatgcgtaccttccacaccggtggtgtcgcgggtgaggacatcacccagggt
ctgccgcgtgtgcaggagatcttcgaggcccgcgtgcccaagggcaaggcgcccatcgcc
gacaccccgggacgcatccgcatcgaggacggcgagcgttcgcggaagatcatcgtgatc
ccggacgacggcagcgacgagatcgtgtacgacaagatctccaagcgcgtcaagctgcgg
gcccacgacggcgaccacgtgaacgtcggcgagaagctcaccgagggcaccatcgacccg
cacgagttgctgcggatcatgggtccgcgtgcggtccaggtccacctgaccagtgaggtc
caggaggtctaccgctcgcagggtgtgctcatccacgacaagcacatcgagatcatcatc
cgccagatgctcaagcgggtgacggtcatcgactcgggcgccgcggagttcctgccgggc
gtgctggtcgaccgggcgctgttcgagtccgagaaccgccggatcgtgggcgagggcggt
gagcccgctgccggtcgtccggtgctcatgggtatcaccaaggcctcgctggcgaccgac
tcctggctctcggcggcctccttccaggagaccacccgggtgctcaccgacgcggcgatc
aactcgcgcagcgactcgctcgtcggcctcaaggagaacgtcatcatcggtaagctcatc
ccggccggtacgggcatcagcaagtaccgcaacatccgggtcgagccgaccgaggaggcg
aaggccaaggtgtactcgatgaccgggtaccccgagaccgactacgggttcgggccggcc
agcggccaggcggttccgctcgacgacttcgacttcggttcctaccgctga
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