Actinoplanes sp. N902-109: L083_2035
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Entry
L083_2035 CDS
T02655
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn03030
DNA replication
actn03430
Mismatch repair
actn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L083_2035
03430 Mismatch repair
L083_2035
03440 Homologous recombination
L083_2035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
actn03032
]
L083_2035
03400 DNA repair and recombination proteins [BR:
actn03400
]
L083_2035
Enzymes [BR:
actn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L083_2035
DNA replication proteins [BR:
actn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L083_2035
DNA repair and recombination proteins [BR:
actn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L083_2035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGL15545
UniProt:
R4LJX4
LinkDB
All DBs
Position
2211595..2215128
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDSFVHLHVHTEYSMLDGAARVKELLAEANRLGMPAAAITDHGNMHGAYDFYTQAKAAG
VTPVIGVEAYVAPESRLTKSRIKWGRPEQKSDDISGNGAYTHMTMWARNAVGLKNLFRLN
SRASMEGQLGKYPRMDFDIIAEHAEGIMGTTGCPSGAVQTRLRLGQFDEALKSAAMYQEA
LGKDNYFLEIMDHGLSIERRVREGLIEIGKKLGIKPLVTNDSHYTHEAQAEAHDVLLCVQ
TGSNVADPNRFRFDGAGYFVKSADQMRAVDSSDAWQEGCRNTLLVAERVDVDGMFTFKNL
MPRFPIPEGYSEEEYFRHVAFEGLRNRFPDGIPETHIKQAEYELGVIIQMGFPSYFLVVA
DFIQWSKRNGIAVGPGRGSAAGSLIAYAMGITDLDPLPHGLIFERFLNPERISMPDVDID
FDERRRGEVIRYVTERWGEDKVAQIATFGTIKAKAAIKDASRVLGYPFAVGDRITKAMPP
DVMGKGIPLSGIFDKDHKRYNEAGEIRSMYEQDPDVKKVIDTARGIEGLIRQTGVHAAGV
IMSAEPIIDHIPLMRRPADGVIITQFDYPTCETLGLLKMDFLGLRNLTILDDAVKNIKLN
HELDLDLLKVPLDDPKAYDLLARGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVLALYR
PGPMGVESHTNYALRKNGLQEITPIHPELKDPLAEILEPTYGLIVYQEQVQRAAQILAGY
TLGQADLLRRAMGKKKKEILDKEFIPFRDGCRAHGYSDEAIQAVWDVLVPFAGYAFNKAH
SAAYGLVSYWTAYLKAHYPAEYMAGLLTSVGDDKDKMAMYLAECRRMGIQVLPPDVNQSA
GPFTPVGKDIRFGLGAVRNVGANVVEAIARCREEKSEYKDFYDFLSKVDAVACNKRTIES
LIKAGAFDSMGHSRKGLLAVHAEAIDAYADVKRNEAAGQFDLFGAFGDENGGSAATVAMP
TITTDEWDKRDKLSFEREMLGLYVSDHPLAGLEQVLSNAADTTIASLNEEGSVPDGSVVT
LAGILTGVQRRITKQGRAWASATLEDLAGGVEALFFPNTYEVIGQYIAEDAIVVVKGRVD
RRDDTPRIMAMDMSMPDVTHNPDTKPITLTMPITRCTPPLVSELKEILVSHPGDSEVHVH
LLNGSRKTVMRLGGFKVAPTPALRADLKMILGPSAVA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgactcgttcgtgcacctgcacgtgcacaccgagtattcgatgctcgacggcgcc
gcccgggtgaaggagttgctggccgaggccaatcgcctcggcatgccggccgcggccatc
accgaccacggcaacatgcacggcgcctacgacttctacacccaggcaaaggccgccggg
gtcaccccggtcatcggcgtcgaggcctacgtggcgccggagtcgcggctgaccaagagc
cgcatcaagtggggccgtccggagcagaagagcgacgacatctccggcaacggcgcctac
acccacatgacgatgtgggcgcgcaacgccgtcgggctcaagaacctgttccggctcaac
tcgcgggcctcgatggagggccagctcggcaagtacccgcggatggacttcgacatcatc
gccgagcacgccgagggcatcatgggcaccaccggctgcccgtccggcgcggtgcagacc
cggctgcggctgggccagttcgacgaggcgctcaagtccgccgcgatgtatcaggaagcc
ctcggcaaggacaactacttcctcgagatcatggaccacgggctgtccatcgagcgccgg
gtccgcgagggcctgatcgagatcggcaagaagctcggcatcaagccgctggtgaccaac
gactcgcactacacccacgaggctcaggccgaggcgcacgacgtgctgctgtgcgtgcag
accggcagcaacgtggccgaccccaaccggttccggttcgacggcgcgggctatttcgtg
aagtccgccgaccagatgcgcgcggtcgactcctccgacgcctggcaggaaggctgccgc
aacacgctgctggtggccgagcgggtggatgtcgacggcatgttcacgttcaagaacctg
atgccgcgcttcccgatcccggagggctactccgaggaggaatacttccggcacgtcgcg
ttcgaggggctgcgcaaccggttcccggacggcatccccgagacgcacatcaagcaggcc
gagtacgagctcggcgtgatcatccagatgggcttcccgtcgtacttcctcgtggtcgcc
gacttcatccagtggtccaagcgcaacggcatcgcggtcggtccgggccgtggctcggcg
gcgggctcgctgatcgcgtacgccatgggcatcaccgacctcgacccgctgccgcacggg
ctgatcttcgagcggttcctcaaccccgagcgcatctcgatgcccgatgtcgacatcgac
ttcgacgagcgccggcgcggtgaggtcatccggtacgtcaccgagcgctggggcgaggac
aaggtcgcgcagatcgccacgttcggcacgatcaaggccaaggccgcgatcaaggacgcg
tcccgggtgctcggctacccgttcgcggtgggcgaccggatcaccaaggccatgccgccg
gacgtgatgggcaagggcatcccgctgtcgggcatcttcgacaaggaccacaagcgttac
aacgaggccggcgagatccgctcgatgtacgagcaggaccccgacgtcaagaaggtgatc
gacaccgcccggggcatcgagggcctgatccggcagaccggtgtgcacgccgccggcgtc
atcatgagcgccgagccgatcatcgaccacatcccgctgatgcgccgccccgccgacggg
gtgatcatcacgcagttcgactacccgacctgcgagacgctgggcctgctcaagatggac
ttcctgggcctgcgcaacctgacgatcctcgacgacgcggtcaagaacatcaagctcaac
cacgagctcgacctcgacctgctcaaggtgccgctggacgaccccaaggcgtacgacctg
ctggcccgcggcgacacgctcggcgtgttccagctcgacggtggcccgatgcgctcgctg
ctgcggctgatgaagccggacaacttcgaggacatctccgccgtgctcgcgctgtaccgc
ccgggtccgatgggcgtcgagtcgcacaccaactacgcgctgcgcaagaacggcctgcag
gagatcaccccgatccacccggagctgaaggacccgctcgcggagatcctcgagcccacg
tacggcctgatcgtttatcaggagcaggtgcagcgcgccgcgcagatcctcgcgggctac
accctgggccaggccgacctgctgcgccgcgccatgggtaagaagaagaaggagatcctc
gacaaggagttcatcccgttccgggacggctgccgcgcgcacggctactccgacgaggcc
atccaggcggtgtgggacgtgctggtcccgttcgccggctacgcgttcaacaaggcccat
tccgcggcgtacggcctggtgtcctactggacggcgtacctcaaggcgcactacccggcg
gagtacatggccggtctgctgacctcggtcggcgacgacaaggacaagatggcgatgtat
ctggccgagtgccggcgcatgggcatccaggtcctgccgcccgacgtcaaccagtccgcc
ggcccgttcaccccggtcggcaaggacatccgcttcggtctgggcgcggtgcgcaacgtc
ggtgccaacgtggtcgaggcgatcgcccgctgccgcgaggaaaagagcgagtacaaggac
ttctacgacttcctgtccaaggtcgacgcggtggcctgcaacaagcggaccattgaatcg
ctgatcaaggcgggcgcgttcgactcgatggggcacagccgcaagggcctgctcgcggtg
cacgccgaggccatcgacgcctatgccgacgtcaagcggaacgaggccgccggtcagttc
gacctgttcggcgcgttcggcgacgagaacggcggcagcgcggccacggtggccatgccg
acgatcaccaccgacgagtgggacaagcgcgacaagctctcgttcgagcgcgagatgctc
ggcctgtacgtctccgatcacccgctcgcggggctggagcaggtgctctccaacgcggcc
gacaccaccatcgcctcgctcaacgaggagggctcggtcccggacggctcggtggtcacg
ctcgccggcatcctcaccggggtccagcggcgcatcaccaagcagggccgggcctgggcg
tcggccaccctggaggacctcgccggtggggtggaggcgctgttcttccccaacacgtac
gaggtgatcggccagtacatcgccgaggacgccatcgtcgtggtgaagggccgggtggac
cgccgcgacgacacgccgcggatcatggcgatggacatgtcgatgcccgacgtcacgcac
aaccccgacaccaagccgatcacgctgaccatgccgatcacccggtgcacgccgccgctg
gtgtcggagctcaaggagatcctggtcagccatcctggcgacagcgaggtgcacgtccac
ctgctcaacggcagccgcaagacggtcatgcggctgggcgggttcaaggtggcgccgacg
ccggcgttgcgggccgacctcaagatgatcctcggcccgtcggcggtcgcgtga
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