Actinoplanes sp. N902-109: L083_3682
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Entry
L083_3682 CDS
T02655
Symbol
recD
Name
(GenBank) RecD/TraA family helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L083_3682 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actn03400
]
L083_3682 (recD)
Enzymes [BR:
actn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L083_3682 (recD)
DNA repair and recombination proteins [BR:
actn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L083_3682 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
UvrD-helicase
HTH_IclR
DEAD
PIF1
P-loop_TraG
HHH_2
UvrD_C
AAA_16
PhoH
NPHP3_N
nSTAND3
DUF87
AAA_10
NACHT
AAA
DUF815
Motif
Other DBs
NCBI-ProteinID:
AGL17192
UniProt:
R4LCT0
LinkDB
All DBs
Position
4381105..4383267
Genome browser
AA seq
720 aa
AA seq
DB search
MLEAVLERLTYVNEETGYTVARVAGGQGSALLTVVGALLGAQPGESLRMRGWWTSHAQYG
RQFEVMSYTTVLPATTQGIRRYLGSGLIKGIGPVFAERIVDHFGTETLTVIEETPQRLVE
VPGLGPKRTAKITAAWLEQKAIKEVMLFLQSVNVSTSVAVRIYKKYGDESIRVVKEEPYR
LAAEVWGIGFKTADAIAQAVGIPHDSPERVKAGLQFALSEATDDGHCFLPVDELVPRATG
ILDVPEPLVARCLTDLVGAEGVVREAVADADAVYLTPFHRAEVSLANTLLTLLHTRADRM
PHFAQVDWIKALGWLHQRTGTALAPEQEQAVRLALTAKVAVLTGGPGCGKSFTVRSIVEL
AAAKRAKILLVAPTGRAAKRLAELTGQPAATVHRLLKLQPGGDATYDRDNPLDVDLLVVD
EASMLDLILANKLIKAVPPGAHLLMVGDVDQLPSVGAGEVLRDLLAAEAVPRVRLTQVFR
QAADSGVVTNAHRVNAGKPPLFQGLRDFFLFPCEDTEEAAALTADVVCRRIPAKFGLDAR
REVQVLAPMHRGPAGAGALNTLLQNSLTPGREGMPEKRVGGRVFRVGDKVTQIRNNYDKG
QAGVFNGTVGVVTAINPDDQQLTVRTDEDELIDYDFDELDELAHAYALTIHRSQGSEYPA
VVVPLTTSAWMMLQRNLLYTAITRAKKLVVLVGSRRALAAAVRTVGAGRRHTALAHRLSP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaagccgtgctcgaacggctgacctatgtcaacgaggagaccggctacaccgtg
gcacgggtcgccggcggccaggggtcggcactgctgaccgtggtcggcgcgctgctgggt
gcgcagccgggcgagagcttgcggatgcgtggatggtggacctcgcatgcccagtacggt
cgtcagttcgaggtcatgtcgtacaccacggtgctaccggccacgacccagggcatccgc
cgctacctgggctccgggctcatcaaggggatcgggccggtgttcgccgagcggatcgtc
gaccacttcggcaccgagacgctgaccgtcatcgaggagacgccccagcgcctcgtcgag
gtgccggggctggggccgaaacggaccgccaagatcaccgccgcgtggctggagcagaag
gccatcaaggaggtgatgctcttcctgcagagcgtcaacgtgtcgacatcggtcgcggtc
cggatctacaagaagtacggcgacgagtcgatccgcgtcgtcaaggaggaaccgtaccgg
ctggctgccgaggtgtggggcatcggcttcaagaccgccgacgcgatcgcgcaggcggtg
ggcatcccgcatgacagccccgaacgggtcaaggcgggactgcagttcgcgctgtcggag
gccaccgatgacgggcactgcttcctgccggtcgatgagctggtgcccagggcgaccggg
atcctggacgtcccggagccgctcgtcgcgcgctgcctgactgacctggtcggagcggag
ggcgtggtgcgcgaggcggtggcggacgccgacgctgtctatctcacgccgttccaccgt
gccgaggtgtcgctggccaacacgctgctgacgctgttgcacacccgggccgaccggatg
ccgcacttcgctcaggtcgactggatcaaggcgctgggctggctgcaccagcgcaccggc
accgcgctggcacccgagcaggagcaagccgtgcggctcgcgctgaccgcgaaggtcgcg
gtcctgaccggcgggcccgggtgcggcaagagcttcaccgtacggtcgatcgtggagctc
gccgccgccaagcgcgccaagatcctgctggtcgctccgaccggccgggccgcgaaacgg
ctcgccgagctgaccgggcagccggcggccacagtgcaccggctgctcaagctgcaaccg
ggcggggacgccacctacgaccgggacaacccgcttgatgtcgacttgctggtggtcgac
gaggcgtcgatgctcgacctgatcctggccaacaagttgatcaaggccgtgccgccgggc
gcgcacctgctgatggtcggtgacgtcgaccagctgccgtcggtgggcgcgggtgaggtg
ctgcgggatctgctggcggcggaggcggtgccccgggtgcggctgacgcaggtgttccgc
caggccgcggattcgggtgtggtgaccaacgcgcaccgggtcaacgccgggaagccgccg
ctgttccagggcctgcgcgacttcttcctgttcccgtgcgaggacaccgaggaggcggcg
gcgctgaccgcggacgtcgtgtgccggcgcatcccggcgaagttcggcctcgacgcgcgt
cgcgaggtgcaggtgctggccccgatgcaccgtggaccggctggtgccggtgccctcaac
acgctgctgcagaacagtttgaccccgggccgcgaggggatgccggagaaacgggtcggc
ggccgggtgttccgggtcggcgacaaggtcacccagatccgcaacaactacgacaagggc
caggcgggcgtcttcaacggtacggtcggcgtggtgaccgcgatcaaccccgacgatcaa
cagttgacggtccgtaccgatgaggacgagctgatcgactacgacttcgacgagctcgac
gagttggcccatgcgtacgccttgacgatccaccggtcgcagggttcggagtacccggcc
gtggtggtgccactgaccaccagcgcctggatgatgctccagcgcaacctgctctacacg
gcgatcacccgggccaagaaactcgtcgtcctggtgggctcgcgccgggcgctggccgcc
gcggtccgcacggtcggtgcgggccgccgccacacggcgctggcgcaccgcttgagcccc
tga
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