Actinoplanes sp. N902-109: L083_3725
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Entry
L083_3725 CDS
T02655
Symbol
pel
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn00040
Pentose and glucuronate interconversions
actn01100
Metabolic pathways
actn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
L083_3725 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L083_3725 (pel)
Enzymes [BR:
actn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
L083_3725 (pel)
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AGL17235
UniProt:
R4LPP8
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Position
complement(4428379..4429560)
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AA seq
393 aa
AA seq
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MRQTLAPNDGWASAGTGTTGGAAADAGHVYLVRNRTDLLAALDNGSTVPKIVLVSGRIDM
MTGSCADYAAPGYDLDAFLAAYDPAVWGRTTRPAGPLEDARVASARLQGAQIRIPVGSNT
TLIGVNGGRIDHGSVTLTNVSNVIVRNLELTDAADCFPAWDPTDGTTGNWNSLYDLVSLS
GATNVWIDHNTLSDGNNHDSDQPLHFDRPYQVHDGASDIIRGSDLVTVSWNNYYDHDKTM
LIGSTDTPGVDVGKLRVTVHHNKFGNVLQRAPRVRFGQVDVFDNLYVATDADYSYSLGVG
VESSICAQNNFFQLSEDLAPAGVLKDWKGTRITTIGNLVRSGSRPPRPVDLVTEYNATHD
PDFTPDAGWVPTLRRHVDPAAAVPALVTTAGRH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtgcggcagacgctggccccgaacgacggctgggcctcggcggggaccggcaccaccggt
ggggccgcagccgacgccgggcacgtctacctcgtccgcaaccggaccgatctgctcgcc
gcgctcgacaacggcagcaccgtacccaagatcgtgctggtcagcgggcgcatcgacatg
atgaccggcagctgcgccgactacgccgcacccggctacgacctggacgccttcctcgcg
gcgtacgacccggcggtatggggccgcaccaccagacccgccggcccgctggaggacgcc
cgggtcgcatcggcccggttgcagggcgcgcagatccgcatccccgtcggcagcaacacc
acgttgatcggagtcaacggtggacgtatcgaccacggcagcgtgaccctcaccaatgtc
agcaacgtgatcgtgcgcaacctcgagctgaccgacgccgccgactgcttcccggcctgg
gacccgaccgacggcacaaccgggaactggaactccctgtacgacctggtgtcgctgagc
ggtgccacgaacgtgtggatcgaccacaacacgctcagcgacggcaacaaccacgacagc
gaccagccgctccacttcgaccggccgtaccaggtgcacgacggcgccagcgacatcatc
cgcggctccgacctggtcacggtgtcctggaacaactactacgaccacgacaagacaatg
ttgatcggatcaacagacacacccggggtcgacgtgggcaagctccgcgtgacggtgcac
cacaacaagttcggcaacgtgctgcagcgcgccccgcgcgtccgcttcggccaggtcgac
gtcttcgacaacctgtacgtggcgacggatgccgactactcctactccctcggcgtcgga
gtcgagtcgtcgatctgtgcgcagaacaacttcttccagctcagcgaggacctggcgccc
gccggcgtactcaaggactggaaaggcacccgcatcaccacgatcggcaatctcgtccgc
tccggcagccgcccgccccgcccggtcgacctggtgaccgagtacaacgccacccacgac
ccggacttcaccccggacgcgggctgggtgcccaccctccgcagacacgtcgacccggcc
gccgccgtcccagccctggtcacaacagccggccggcactga
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