Actinoplanes sp. N902-109: L083_3797
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Entry
L083_3797 CDS
T02655
Name
(GenBank) sig b/f/g subfamily RNA polymerase sigma-28 subunit
KO
K03090
RNA polymerase sigma-B factor
Organism
actn
Actinoplanes sp. N902-109
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actn03021
]
L083_3797
Transcription machinery [BR:
actn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L083_3797
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
MarR
HTH_10
DUF134
HTH_3
DUF7343
HTH_31
HTH_24
Sigma70_ECF
HTH_23
MarR_2
HTH_37
GerE
Phage_antitermQ
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
AGL17307
UniProt:
R4LDB5
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All DBs
Position
4508087..4508890
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AA seq
267 aa
AA seq
DB search
MTVVAAPIDSEVAADQSATTDRASELIAAFAALPATHPSRSRVRDRAIEAWMPMARHLAN
RYAGRGEPLDDLVQVATIGLIKAVDRFEADRGVEFAGFAIPTIIGEIKRHFRDRTWSIRV
PRRLQELRLAITAANTNLTHTLGRAPTVADIAAYLEVTEEEVLEGLEGARAYNATSLSTP
ISADGNTELGDTLGGEDSEYELAETRVALGPALAALDERERKIITLRFYGNLTQSQIAEQ
IGISQMHVSRLLTKALTKLRGNLDFAA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgactgttgtcgctgctccgatcgacagcgaggtcgctgctgaccagtcggcgacgacg
gaccgcgccagcgagctgatcgcggccttcgcagccctgcccgccacgcacccgtcccgg
tcccgggtccgtgaccgggccatcgaggcctggatgccgatggcccgccacctcgccaac
cgctacgccggtcgcggcgagccgctcgacgacctggtccaggtcgccacgatcggcctg
atcaaggcggtcgaccggttcgaggcggaccgcggcgtcgagttcgccggcttcgcgatc
ccgaccatcatcggcgagatcaagcggcacttccgcgaccgcacctggtcgatccgggtg
ccgcggcgcctgcaggagctgcgcctggccatcaccgcggccaacaccaacctcacccac
acgctgggccgcgccccgacggtcgccgacatcgccgcgtacctcgaggtcaccgaggag
gaggtgctcgagggcctggagggcgcccgcgcctacaacgccaccagcctgtccaccccg
atcagcgccgacggcaacaccgaactgggcgacaccctcggcggcgaggacagcgagtac
gagctggccgagacgcgcgtcgcgctgggcccggccctggccgccctggacgagcgcgag
cgcaagatcatcacgctgcggttctacggcaacctcacccagtcgcagatcgccgagcag
atcggcatctcccagatgcacgtctcgcggctgctgaccaaggcgctcaccaagctgcgc
ggcaacctggacttcgccgcctga
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