Actinoplanes sp. N902-109: L083_5487
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Entry
L083_5487 CDS
T02655
Name
(GenBank) Pectate lyase/Amb allergen
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn00040
Pentose and glucuronate interconversions
actn01100
Metabolic pathways
actn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
L083_5487
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L083_5487
Enzymes [BR:
actn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
L083_5487
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF5749
Motif
Other DBs
NCBI-ProteinID:
AGL18997
UniProt:
R4LI29
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All DBs
Position
complement(6293659..6294627)
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AA seq
322 aa
AA seq
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MSALPRSARATLAALSAAVLAVGVSQVVGQSTAVAAESSPVGFAGLNGGTTGGSASTVVT
VTSASALTSAISSSTSQTVRVSGLISISGMLTVASNKTIIGVGSGSGVTGGGFNLSSVRN
VIIRNLVFRNASDDSINVQESSTNIWIDHNDLANGYDGLIDIKRGSDFITVSWNHLHNHD
KSMLLGHSDDNAAQDTGHLRVTYVHNWFDGTNQRHPRVRFANPVHVLNNYYSNNGSYGVA
STENAGVYVERNYFENVGNPTVTQTGDSAPGNLKVLNNYKVNSGTEQVRNGTGVAAIPYS
YTPESNSTVKATVTAGAGTGKI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcacttccccggtccgcccgggcgaccctcgccgcgctgtcggccgctgtcctc
gcggtcggcgtctcccaggtcgtcggccagtccaccgccgtcgccgcggagtccagcccg
gtcgggttcgccggcctcaacggcggcaccaccggcggctcggcgagcaccgtggtcacc
gtcacctcggcgtccgcgctcacgtcggcgatcagctccagtacgtcgcagaccgtccgg
gtgtccggcctgatctcgatctccggcatgctcacggtcgcgtcgaacaagacgatcatc
ggcgtgggctccggctccggcgtcaccggcggcggcttcaacctgtccagcgtcaggaac
gtcatcatccgcaacctggtgttccgcaacgcgagcgacgactcgatcaacgtgcaggag
agcagcaccaacatctggatcgaccacaacgacctggccaacggctacgacggcctgatc
gacatcaagcgcggctcggacttcatcacggtgtcctggaaccacctgcacaaccacgac
aagtccatgctgctcgggcacagcgacgacaacgccgcgcaggacaccgggcacctgcgc
gtcacctacgtgcacaactggttcgacggcaccaaccagcgccacccgcgggtccgcttc
gccaacccggtgcacgtgctgaacaactactacagcaacaacggttcctacggggtcgcc
tccaccgagaacgccggggtctacgtcgaacgcaactacttcgagaacgtgggcaacccg
accgtcacccagaccggcgactccgccccgggcaacctcaaggtcctcaacaactacaag
gtcaactcgggtacggaacaggtgcgcaacggcaccggcgtcgcggccatcccgtactcc
tacacccccgagtccaactccaccgtgaaggcaaccgtcaccgcgggcgccggcaccggc
aagatctga
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