Actinoplanes sp. N902-109: L083_6045
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Entry
L083_6045 CDS
T02655
Name
(GenBank) FliA/WhiG subfamily RNA polymerase sigma-28 subunit
KO
K02405
RNA polymerase sigma factor FliA
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn02020
Two-component system
actn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L083_6045
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L083_6045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actn03021
]
L083_6045
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
actn02035
]
L083_6045
Transcription machinery [BR:
actn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L083_6045
Bacterial motility proteins [BR:
actn02035
]
Flagellar system
Flagellar assembly proteins
Stator
L083_6045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_Tnp_ISL3
HTH_23
RM44_endonuclase
Sas-6_C_CC
KORA
Motif
Other DBs
NCBI-ProteinID:
AGL19555
LinkDB
All DBs
Position
complement(6928646..6929557)
Genome browser
AA seq
303 aa
AA seq
DB search
MTATTDLPATIGITHDAPSARDIEDLVREHMPMVGHLVRELLNRVPGHVHSDDLSSAGFA
ALLGAARTFDPSRGIPFHRFAAVRIRGALLDELRGQDWASRSVRARARRTAQARQELTAA
LGRTPSEAEVAEMLGIGVAELASVEDDVQKAALLSLQGFPTGAAEEMVPETSEGPEDLLL
KRERLGYLHQAIQALPERLRMVVTQSFLQEQPLSEVAAELGVTESRISQLRTEALRLLRE
GLNSSLAPELLTVAAGGPRTRKGCQHRRRNEYFARVAEQGNLSTRLALTDSHGVPIAFAT
RAA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgactgccacgaccgatctccccgccaccatcggcatcacccacgacgcgccatcagcg
cgcgacatcgaggacctcgtccgcgaacatatgccgatggtcggccacctggtccgggaa
ctgctgaaccgtgttcccgggcacgtccactcggacgacctgtcgtccgcgggcttcgcc
gcgctcctcggtgccgcacgcaccttcgacccgagccgcggcatcccgttccaccgcttc
gccgccgtgcgcatccggggtgcgctcctcgacgagctgcgcgggcaggactgggccagc
cgctcggtccgggcccgggcccgccggaccgcgcaggcccgtcaggagctcaccgccgcc
ctgggccgtacgcccagcgaggccgaggtggccgagatgctcggcatcggcgtcgccgag
ctggcctcggtcgaggacgacgtgcagaaagccgcgttgctcagcctgcagggcttcccg
acgggcgcggccgaggagatggtgcccgagacctccgagggccccgaggacctgctgctc
aagcgggaacggctcggctacctgcaccaggcgatccaggcgctgccggaacgcctgcgg
atggtggtgacccagtcgttcctgcaggagcaaccgctcagcgaggtggccgccgagctc
ggcgtcaccgagtcgcggatctcccagctgcgcaccgaggcgctgcggttgctgcgggag
ggcctgaacagctcgctggccccggagctgctgaccgtggccgcgggtggtccgcgtacc
cgcaagggctgtcagcaccgccgccgcaacgagtacttcgcccgggtcgccgagcagggc
aacctgagcacccggctggcgctgacggacagccacggcgtcccgatcgcgttcgcgacc
agggcggcatag
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