KEGG   Actinoplanes sp. N902-109: L083_6217
Entry
L083_6217         CDS       T02655                                 
Name
(GenBank) FliA/WhiG subfamily RNA polymerase sigma-28 subunit
  KO
K02405  RNA polymerase sigma factor FliA
Organism
actn  Actinoplanes sp. N902-109
Pathway
actn02020  Two-component system
actn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:actn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    L083_6217
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    L083_6217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:actn03021]
    L083_6217
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:actn02035]
    L083_6217
Transcription machinery [BR:actn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     L083_6217
Bacterial motility proteins [BR:actn02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    L083_6217
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 KORA HTH_Tnp_ISL3 RM44_endonuclase HTH_Crp_2 NirdL-like_HTH
Other DBs
NCBI-ProteinID: AGL19727
LinkDB
Position
7109395..7110303
AA seq 302 aa
MTSTTTTAADMTADTATAVPALSVAEQEELIRSHMPLVGHLVRDMLTRIPNHIHRDDLTS
AGLHALVTAARGWDPNRGIPFHRFATTRIRGAILDELRSLDWATRSVRSKARATDATRQS
LMTTLGRTPTNEELAQALGTTTTDLNQTDNDVQRATVLSLQGFTTSSSDDLVTEAAPGPE
DMLLRREQIGYLHHAIGSLPERLQYVITEYFLKERPMADIAADLGVTESRVSQLRGEALS
LLKDGLNTHLDPHLAPVPENPDGITARRRATYYASIAGNTNLHSRLALTNAYGHTTLTQS
VA
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaccagcaccacgacgaccgctgccgacatgactgccgacaccgcgaccgccgtgccg
gccctgtccgtcgccgagcaggaagagctgatccgctcgcacatgccgctcgtcggccac
ctggtgcgcgacatgctcacccgcatcccgaaccacatccaccgcgacgacctgaccagc
gccggcctgcacgccctggtcaccgcggcgcggggctgggacccgaaccgcggcatcccg
ttccaccgcttcgcgaccacccgcatccgcggcgccatcctcgacgagctgcgctcgctg
gactgggcgacccggtcggtgcgcagcaaggcgcgggccaccgacgcgacccggcagagc
ctgatgaccacgctgggccgcacgcccaccaacgaggagctggcccaggcactcggcacc
accacgaccgacctgaaccagaccgacaacgacgtgcagcgcgccaccgtgctgtcgctg
cagggcttcaccaccagcagctccgacgacctggtcaccgaggccgcgccgggcccggag
gacatgctgctgcgccgcgagcagatcggttacctgcaccacgcgatcggctcgctgccc
gagcggctgcagtacgtgatcaccgagtacttcctcaaggagcgcccgatggcggacatc
gccgccgacctgggcgtcaccgagtcgcgggtctcccagctgcggggcgaggcgctgtcg
ctgctcaaggacgggctcaacacccacctggacccgcacctggccccggtgccggagaac
ccggacggcatcaccgcccgccgccgggccacctactacgcctcgatcgccggtaacacc
aacctgcactcgcggctggcgctcaccaacgcctacgggcacaccacgctcacccagagc
gtcgcctga

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