Actinoplanes sp. N902-109: L083_7084
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Entry
L083_7084 CDS
T02655
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L083_7084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
actn03021
]
L083_7084
03019 Messenger RNA biogenesis [BR:
actn03019
]
L083_7084
Transcription machinery [BR:
actn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
L083_7084
Messenger RNA biogenesis [BR:
actn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L083_7084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
NACHT
Exo70_N
VWA_2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AGL20594
LinkDB
All DBs
Position
complement(8066307..8068388)
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AA seq
693 aa
AA seq
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MSDTTDVTSGVSDVADDGATTAAVTKRRRGGTGLSAMLLPELQSLAASLGISGTARMRKG
ELITAISERQNGGAPANGAVTESAPRSRRGSSTATATAAAPAVEAPPAPVAEPVQSAPVQ
QEIVVSAAPAEQAAPAPEQAEPEQGRRSRRDRQDRGDRAERADRDTREPREQGDTRTEGT
ETGERPERGDRPERGERNRDRQRNQQRGDGERSDRSDRSDRGERSDRSDRSERNDRSDRN
DRNDRNDRGDRNDRGPRNDGHDDDDNDGGEGGRRSRRSRFRDRRRGRDRDGDGREGGGGR
EGGGRDSREPHVSEDDVLVPVAGILDVLDNYAFVRTTGYLSGPNDVYVSMSQVKKHGLRR
GDAVTGAVRSAPRDGGEQRRDKYNPLVRLDTINGMEPDEARRRPEFYKLTPLYPQERLRL
ETEPHILTTRVIDLVMPIGKGQRALIVSPPKAGKTMVLQAIANAITHNNPECHLMVVLVD
ERPEEVTDMQRSVKGEVIAATFDRPPQDHTTVAELAIERAKRLVELGHDVVVLLDSVTRL
GRSYNLAAPASGRIMSGGIDSTALYPPKRFLGAARNIENGGSLTILATALVETGSMMDTV
IFEEFKGTGNAELKLDRKIADRRTFPAIDTHPSGTRKEEILLGKEELAIVHKLRKVLSSL
ESSAALDLLLDRLKQTRTNVEFLMQIAKSTPGE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacaccaccgacgtgacgtcgggtgtttctgacgtcgctgatgacggcgccacc
accgcggctgtcaccaagcgccgccgtggcggcacggggctgtccgcgatgctgctgccc
gagctgcagagcctcgccgcgtccctcggcatctccggcaccgcccggatgcgcaagggt
gagttgatcaccgcgatctcggagcgccagaacggcggcgccccggccaacggcgcggtc
accgagagcgccccgcgatcgcgccgtggcagcagcacggcgaccgccaccgcagccgcc
ccggccgtcgaggccccgccggcgccggttgccgagccggtgcagagtgccccggtgcag
caggagatcgtggtctccgccgcgcctgccgagcaggccgcgcccgcccccgagcaggcc
gagccggagcagggccgccgtagccgccgcgaccgccaggaccgcggtgaccgggccgag
cgtgccgaccgcgacacccgtgagccccgcgagcagggcgacacccgcaccgagggcacc
gagaccggtgagcgcccggagcgcggcgaccggcctgagcggggcgagcgcaaccgcgac
cgccagcgcaaccagcagcgcggcgacggcgagcgcagcgaccgcagcgaccgcagcgac
cgtggcgagcgcagcgaccgtagcgaccgtagcgagcgcaacgaccggtccgaccgcaac
gaccggaatgaccgtaacgaccggggtgaccgcaacgatcgcggcccgcgcaacgacggt
cacgacgatgacgacaacgatggtggcgagggcggccgccggagccggcgcagccgcttc
cgtgaccgccgccggggccgcgaccgcgacggtgacggccgcgagggtggcggcggccgc
gagggcggtggccgcgacagccgcgagccgcacgtcagcgaggacgacgtgctcgtgccg
gtcgccggcatcctcgacgtgctcgacaactatgcgttcgtgcggaccaccggctacctg
tccggccccaatgacgtgtacgtgtcgatgtcgcaggtcaagaagcacgggctgcgccgc
ggtgacgcggtcaccggtgccgtgcgctccgcgccgcgcgatggtggtgagcagcgccgc
gacaagtacaacccgctcgtgcggctcgacaccatcaacgggatggaacccgacgaggcc
cgccggcgtcccgagttctacaagctcaccccgctctacccgcaggagcgcctgcggctg
gagaccgagccgcacatcctgaccacccgggtcatcgacctggtgatgccgatcggcaag
ggccagcgggccctgatcgtctcgccgccgaaggccggcaagacgatggtgctgcaggcc
atcgccaacgccatcacgcacaacaaccccgagtgccacctgatggtcgtgctggtcgac
gagcggcccgaagaggtcaccgacatgcagcgctcggtcaagggcgaggtcatcgcggcc
acgttcgaccggccgccgcaggaccacaccacggtcgccgagctggcgatcgagcgggcc
aagcgcctcgtcgagctgggccacgacgtggtcgtgctgctcgactcggtgacccggctc
ggccggtcgtacaacctggcggcgccggcctccggccgcatcatgtccggtggtatcgac
tccacggcgctctacccgcccaagcggttcctcggcgcggcgcgcaacatcgagaacggc
ggctcgctgaccattctcgccaccgcgctggtcgagaccggctcgatgatggacacggtc
atcttcgaggagttcaagggcaccggcaacgccgagctcaagctggaccgcaagatcgct
gaccggcgtaccttcccggccatcgacacgcacccgtccggcacgcgcaaggaggagatc
ctgctcggcaaggaggagctggcgatcgtccacaagctgcgcaaggtgctcagctcactg
gagtcgtcggcggcgctcgacctgctgctggaccggctcaagcagacccgcaccaacgtc
gagttcctcatgcagatcgcgaagagcacacccggcgagtaa
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