Actinoplanes sp. N902-109: L083_7279
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Entry
L083_7279 CDS
T02655
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
actn
Actinoplanes sp. N902-109
Pathway
actn03420
Nucleotide excision repair
actn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
actn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L083_7279
03430 Mismatch repair
L083_7279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
actn03400
]
L083_7279
Enzymes [BR:
actn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L083_7279
DNA repair and recombination proteins [BR:
actn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L083_7279
MMR (mismatch excision repair)
Other MMR factors
L083_7279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Collagen
Motif
Other DBs
NCBI-ProteinID:
AGL20789
UniProt:
R4LYL4
LinkDB
All DBs
Position
complement(8264121..8267609)
Genome browser
AA seq
1162 aa
AA seq
DB search
MARLLRLHAPTAEQAAIIAAPVEPLLVVAGAGSGKTETMASRVVWLVANGYAHPDEILGL
TFTRKAAGELAHRVRMRLGQLVRRLGRHDALAGEPTVATYHSYAARVVTEHGLRAGYEPS
ARLLTEAARWQIVDSLVRSYTGEMTGLNRAPSTVTDDVLALSGELAEHLVDADDLAAWTG
RFFADVQALPGRVYKDVNDVLLRQRHRLTLLPLVRRYEQRKLELEAMDFGDQMARAARVA
RDHPEVGAIERGRYKIVLLDEYQDTSHAQVVLLNALFGGGHPVTAVGDPCQSIYGWRGAS
AGTLDRFPGEFTGPGGREAWVLNLTRSWRNRPEILQVANALSEPLRAAGARVAELIPAQR
VAERVGRRTVACALLETYADEAGWIADAMLEAWRSAAHLPDALPGEIPLEKRPTSAVLVR
VRSQIPAIEEALRARGLPVEVVGLGGLLDTPEVRDVVCTLRVLADPTDGASLLRLLTGAR
WRIGPRDLVALHRRSRAIAAARAAVATSTPADPDEIVGDRLDDATLVEAMADLGAPQQYS
QEGYLRLRSYSRELAELRQRLDQPLPDLVADIERTIGLDVEVAVRGWGAGDAGLARGHLD
ALGDVAARYAGETDGGTLAGFLAFLAAAEEEERGLTPGQVDVVEGAVQVLTAHAAKGLEW
DVVSVAGLTKNVWPGMTRGSDNYLGGIGVLPFPLRGDSAGLPQLDLSAAVDQKDAAAAVT
AFGRAWREHDVREERRLAYVAVTRPRRLLLASGYWWGDGVKRPRGPSVFLDEIRAACQEG
AGVVELWAPEPSADAPNPSAELVASAEWPADPLGARRPAMAAAADLIRRMIAAPDPDAAQ
AFISLAESEQEIAARAGLAADLIRLPTPSEATALAAPDAASGETTRPGEPERPGEPGRPG
ESERSGEPGQAGEPGGDGDDPEIARWRREATLLLAEREERARREGPLDVAVPAHLSVSQL
VVLRRDPQLLARSLRRPLPARPAPHARRGTAFHTWLEQRYGAVRLLDLDELPGAADDEAA
ADEELKALQEAFLAGEWADRTPVEVEVPFATTVAGVVLRGRIDAVFAEPGNRYDVIDWKT
GRRPTAADAEAAAVQLAAYRMAWAALANVPVSRVRAGFHYVRDGVTVRPADLLDADGLAA
LITELPALESPASQAGGGQQVQ
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
ttggcccggctgctgcggttgcatgcgccgacggccgagcaggctgcgatcatcgcggcc
ccggtggagccgctcctggtcgtcgcgggggccgggtcgggcaagacggaaaccatggcg
tcccgggtggtctggctggtggccaacgggtacgcccaccccgacgagatcctgggcctg
accttcacccgcaaggcggccggggagctggcccaccgggtccggatgcggctcggtcag
ctggtacgccggttgggccggcacgacgccctggccggggagccgaccgtggcgacctac
cactcgtacgccgcccgggtggtcaccgagcacgggttgcgcgccgggtacgagccgtcg
gcccggctgctcaccgaggcggcccgctggcagatcgtcgattcgctcgtgcgctcgtac
accggggagatgaccggcctgaaccgcgcgcccagcacggtgaccgacgacgtgctggcg
ctctcgggtgagctggccgagcacctcgtcgacgcggacgacctggccgcctggaccgga
cggttcttcgccgacgtgcaggcgctgcccggccgggtctacaaggacgtcaacgacgtg
ctgctgcgccagcggcaccggctcaccctgctgcccctggtccgccggtacgagcagcgc
aaactcgagctcgaggcgatggacttcggcgatcagatggcccgggcggcgcgggtggcc
cgcgaccatcccgaggtcggcgcgatcgagcggggccgctacaagatcgtgctgctggac
gaataccaggacaccagccacgcccaggtggtgctgctcaacgcgctgttcggcggcggg
cacccggtgaccgcggtcggcgacccgtgccagtcgatctacggctggcgcggtgcctcg
gcgggcaccctcgaccggttccccggcgagttcaccgggcccggcgggcgcgaggcgtgg
gtcctcaacctgacccgcagctggcgcaaccgccccgagatcctccaggtcgccaacgcg
ttgtccgagccgctgcgcgcggccggtgcccgggtcgccgagctgatcccggcccagcgg
gtggctgagcgggtgggccggcgcaccgtcgcgtgcgccctcctcgagacgtacgccgac
gaagccggttggatcgccgacgccatgctggaagcgtggcgctcggccgcccacctgccc
gacgccctgccgggtgagatcccgctggagaaacgtccgaccagcgcggtgctcgtccgg
gtgcgcagtcagatcccggcgatcgaggaggcgttgcgggcccggggcctgcccgtggag
gtggtcgggctgggcgggctgctggacaccccggaggtccgggacgtggtgtgcacgctg
cgggtgctggccgacccgaccgacggggcgtcgttgctgcggctgctcaccggcgcccgc
tggcggatcggcccgcgggacctggtggcgctgcaccgccggtcccgggccatcgcggcg
gcccgggcggcggtcgccacgagcaccccggcggatccggacgagatcgtcggcgaccgg
ctcgacgacgccacgctcgtggaggccatggcggatctcggtgcccctcagcagtactcg
caggagggctatctgcggctccgttcgtacagcagggaattggcggagctgcggcaacgc
ctggaccagccgctgcccgacctggtcgccgacatcgaacggaccatcggcctggacgtc
gaggtcgcggtgcggggctggggcgcgggcgacgcgggcctggcgcgcgggcacctcgac
gccctcggcgacgtcgcggcccggtacgcgggggagaccgacggtggcacgctggcggga
ttcctggccttcctggccgccgccgaggaggaggaacgcggtctcaccccggggcaggtc
gacgtggtcgagggtgcggtgcaggtgctcaccgcgcatgcggccaaggggctggagtgg
gacgtcgtgtcggtcgccgggctgaccaagaacgtctggccgggcatgacccggggctcg
gacaactacctcggcggcatcggcgtgctgccgttcccgctgcgcggcgactcggcgggg
ctgccccagctggatctgtcggcggcggtggaccagaaggacgcggccgcggcggtgacg
gcgttcggacgggcctggcgcgagcatgacgtccgcgaggagcgccggctcgcctacgtc
gcggtgacccggccccggcggttgttgctggcctcgggctactggtggggggacggggtg
aagcggccgcgcgggccgtcggtgttcctcgacgagatccgcgcggcctgtcaggagggc
gccggggtggtcgagctctgggcccccgagccgtccgccgatgccccgaacccgagcgcc
gagctggtggcctcggcggagtggccggccgacccgctgggcgcccggcgtccggccatg
gccgcggcggccgatctgatccgccggatgatcgccgcgccggatccggacgcggcccag
gcgttcatcagcctggccgagtcggagcaggagatcgccgcgcgcgccgggctggccgcg
gacctgatccgcctgcccacgccgagcgaagccaccgccctggccgcgcccgacgccgcc
tcgggcgaaacgacccggcccggcgagcccgagcggcccggcgaacccgggcggcccggc
gagtccgagcggtccggcgaacccgggcaggccggcgagccgggaggagacggcgacgat
ccggagatcgcgcgatggcgccgcgaggccaccctcctgctggccgaacgcgaggaacgc
gcccggcgcgaaggtcccctcgacgtagccgtgccggcgcacctctccgtctcccagctg
gtcgtgctgcgccgcgacccgcagctgctggcccggtcgctgcgccgcccgctgcccgct
cgaccggcgccgcacgctcgccggggcaccgcgttccacacctggctcgagcagcggtac
ggcgcggtgcggctgctggacctcgacgagctgcccggcgcggcggacgacgaggcagcc
gccgatgaggagctgaaggcgctgcaggaggcattcctggccggtgagtgggccgaccgc
accccggtcgaggtggaggtgccgttcgcgacgacggtcgccggggtggtgctgcgcggc
cggatcgatgcggtgttcgccgagccgggcaaccggtacgacgtcatcgactggaagacc
ggtcgccggcccaccgcggcggacgctgaggctgccgcagtgcaactggccgcgtacaga
atggcatgggctgccctggcgaacgtgccggtgtcgcgcgtccgggcaggatttcactat
gtccgcgacggggtgaccgtgcgcccggccgacctgctcgacgccgacgggctggccgcg
ttgatcaccgagctgcccgcactggagtcgccggcgtcacaggccggcggcggccagcag
gtgcaatag
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