Actinomyces sp. oral taxon 897: C3V41_01085
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Entry
C3V41_01085 CDS
T05399
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
acto
Actinomyces sp. oral taxon 897
Pathway
acto00300
Lysine biosynthesis
acto00470
D-Amino acid metabolism
acto01100
Metabolic pathways
acto01110
Biosynthesis of secondary metabolites
acto01120
Microbial metabolism in diverse environments
acto01230
Biosynthesis of amino acids
Module
acto_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
acto_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
acto00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C3V41_01085 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C3V41_01085 (lysA)
Enzymes [BR:
acto01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
C3V41_01085 (lysA)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
RHA1_ro05818_N
Motif
Other DBs
NCBI-ProteinID:
AVM62755
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Position
256407..257882
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AA seq
491 aa
AA seq
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MTAPDSASRVPAGEAPLGALVCPEPSERPDLWPTTVRRTASGELALGGLGVSTLLEQAST
PVFVLDEADFRGRAATWSAAMAEEFWEGYGMRGGEAFYAGKAFLTTSVARMVLEEGMGID
TASRVELAVGLKALVQVDGPQAATAARRLGLHGNGKTAQEVASAVRHRVGHLVIDSAEEV
GHAVAAVRRLRSSGDLGAGERAGVMVRLTTGIHAGGHEYVATAHEDQKFGLSVATGAARR
VIDAVLAAEELTLTGLHSHIGSQIMDLAGFRKAVEVVLRLRHEVAAEGGCLCPEIDLGGG
YGIAYTGADPVAPTAAEVARALAEAVRTTCAELGDEPPRVSVEPGRCVAGPSQVTFYTVT
GLKRVELGEGTCRLYVSIDGGMSDNIRPALYGAAYTALLASRRPDPAAGLVRCRVVGKHC
ESGDVVVRDVDLPADLAVGDVLAVPATGAYGRSMASNYNLFTRPGVRWVREGRSGWVLRP
ETVEDLLALEG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcccccgactccgccagccgtgtccccgccggggaggcgcccctgggcgccctg
gtctgccccgagccctccgagcgccccgacctgtggcccacgacggtacggcgtaccgcc
tccggcgagctcgccctggggggcctgggcgtctcaacgctcctggagcaggcctccacc
cccgtcttcgtcctggacgaggccgacttccggggccgcgccgccacctggagcgccgcc
atggccgaggagttctgggaggggtacggcatgaggggcggtgaggccttctacgccggc
aaggccttcctgaccacctcggtggcccggatggtccttgaagagggcatgggcattgac
accgcctcgcgcgtcgagctggccgtgggcctcaaggccctggtgcaggtcgacggcccg
caggccgccacggcggcccggcgcctggggctgcacggcaacggcaagaccgcccaggag
gtggcctcagccgtgcgccaccgcgtgggccacctggtcattgactccgccgaggaggtc
ggccacgccgtcgccgccgtgcgccggctcaggagcagcggcgacctcggggcgggggag
cgcgccggggtcatggtgcgtctgaccaccggcatccacgccggggggcacgagtacgtc
gccaccgcccacgaggaccagaagttcggcctgtcggtggccaccggcgccgcccgccgc
gtcattgacgccgtcctggccgccgaggagctcaccctgaccggcctgcactcccacatc
ggctcccagatcatggacctggcgggcttccgcaaggcggtcgaggtggtgctgcgcctg
cgtcacgaggtcgccgcggagggcggctgcctgtgcccggagatcgacctgggcggcggc
tacggcatcgcctacaccggcgccgacccggtggcccccacggcggccgaggtggcccgc
gccctggccgaggccgtgcgcaccacctgcgccgagctgggcgacgagcccccccgcgtc
tcggtggagccgggccggtgcgtcgcgggccccagccaggtcacgttctacaccgtcacc
gggctcaagcgcgtcgagctgggggaggggacctgccggctctacgtcagtatcgacggg
ggcatgagcgacaatatccgccccgccctgtacggggccgcctacaccgcgctgctcgcc
agccgccgccccgacccggcagccggcctggtgcgctgccgcgtggtgggcaagcactgc
gagtccggcgacgtcgtggtacgggacgtggacctgcccgccgacctggccgtcggcgat
gtgctggccgtacccgccacgggggcctacgggcgctccatggcctccaactacaacctc
ttcacccgccccggtgtgcgctgggtgcgcgaggggcgttccggttgggtcctgcggccc
gagaccgtggaggacctgctggccctggaggggtag
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